Description : component *(eS21) of small ribosomal-subunit (SSU) proteome & original description: none
Gene families : OG0004049 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004049_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00016p00256280 | evm_27.TU.AmTr_v1... | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.02 | OrthoFinder output from all 47 species | |
AMTR_s00045p00200410 | evm_27.TU.AmTr_v1... | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.06 | OrthoFinder output from all 47 species | |
AT3G53890 | No alias | Ribosomal protein S21e | 0.04 | OrthoFinder output from all 47 species | |
AT5G27700 | No alias | Ribosomal protein S21e | 0.06 | OrthoFinder output from all 47 species | |
Als_g29961 | No alias | component *(eS21) of small ribosomal-subunit (SSU)... | 0.04 | OrthoFinder output from all 47 species | |
Azfi_s0022.g016110 | No alias | component *(eS21) of small ribosomal-subunit (SSU)... | 0.04 | OrthoFinder output from all 47 species | |
Azfi_s0185.g056623 | No alias | component *(eS21) of small ribosomal-subunit (SSU)... | 0.04 | OrthoFinder output from all 47 species | |
Azfi_s2932.g113764 | No alias | component *(eS21) of small ribosomal-subunit (SSU)... | 0.05 | OrthoFinder output from all 47 species | |
Cba_g37485 | No alias | component *(eS21) of small ribosomal-subunit (SSU)... | 0.05 | OrthoFinder output from all 47 species | |
Cba_g46482 | No alias | component *(eS21) of small ribosomal-subunit (SSU)... | 0.01 | OrthoFinder output from all 47 species | |
Ceric.37G056600.1 | Ceric.37G056600 | component *(eS21) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00020780.14 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.01 | OrthoFinder output from all 47 species | |
Cre03.g203450 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.1 | OrthoFinder output from all 47 species | |
Dcu_g35214 | No alias | component *(eS21) of small ribosomal-subunit (SSU)... | 0.04 | OrthoFinder output from all 47 species | |
Dcu_g44956 | No alias | component *(eS21) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
Dde_g15855 | No alias | component *(eS21) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01017756001 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.08 | OrthoFinder output from all 47 species | |
GSVIVT01031151001 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.06 | OrthoFinder output from all 47 species | |
Gb_27652 | No alias | component RPS21 of SSU proteome | 0.04 | OrthoFinder output from all 47 species | |
Gb_35516 | No alias | component RPS21 of SSU proteome | 0.06 | OrthoFinder output from all 47 species | |
LOC_Os03g46490.1 | LOC_Os03g46490 | component RPS21 of SSU proteome | 0.04 | OrthoFinder output from all 47 species | |
MA_73657g0010 | No alias | component RPS21 of SSU proteome | 0.03 | OrthoFinder output from all 47 species | |
Mp4g22150.1 | No alias | component RPS21 of SSU proteome | 0.08 | OrthoFinder output from all 47 species | |
Ore_g39678 | No alias | component *(eS21) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
Pnu_g15530 | No alias | component *(eS21) of small ribosomal-subunit (SSU)... | 0.02 | OrthoFinder output from all 47 species | |
Pp3c26_3000V3.1 | Pp3c26_3000 | Ribosomal protein S21e | 0.06 | OrthoFinder output from all 47 species | |
Sam_g07802 | No alias | component *(eS21) of small ribosomal-subunit (SSU)... | 0.05 | OrthoFinder output from all 47 species | |
Sam_g07803 | No alias | component *(eS21) of small ribosomal-subunit (SSU)... | 0.04 | OrthoFinder output from all 47 species | |
Smo271040 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.05 | OrthoFinder output from all 47 species | |
Solyc01g066840.3.1 | Solyc01g066840 | component RPS21 of SSU proteome | 0.04 | OrthoFinder output from all 47 species | |
Solyc04g074910.3.1 | Solyc04g074910 | component RPS21 of SSU proteome | 0.03 | OrthoFinder output from all 47 species | |
Spa_g19976 | No alias | component *(eS21) of small ribosomal-subunit (SSU)... | 0.06 | OrthoFinder output from all 47 species | |
Zm00001e001637_P002 | Zm00001e001637 | component RPS21 of SSU proteome | 0.08 | OrthoFinder output from all 47 species | |
Zm00001e011684_P002 | Zm00001e011684 | component RPS21 of SSU proteome | 0.06 | OrthoFinder output from all 47 species | |
Zm00001e031393_P002 | Zm00001e031393 | component RPS21 of SSU proteome | 0.06 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan |
CC | GO:0005840 | ribosome | IEA | Interproscan |
BP | GO:0006412 | translation | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003723 | RNA binding | IEP | HCCA |
MF | GO:0003746 | translation elongation factor activity | IEP | HCCA |
MF | GO:0005488 | binding | IEP | HCCA |
MF | GO:0005515 | protein binding | IEP | HCCA |
BP | GO:0006417 | regulation of translation | IEP | HCCA |
BP | GO:0006448 | regulation of translational elongation | IEP | HCCA |
BP | GO:0006449 | regulation of translational termination | IEP | HCCA |
BP | GO:0006457 | protein folding | IEP | HCCA |
MF | GO:0008135 | translation factor activity, RNA binding | IEP | HCCA |
MF | GO:0008237 | metallopeptidase activity | IEP | HCCA |
BP | GO:0009891 | positive regulation of biosynthetic process | IEP | HCCA |
BP | GO:0009893 | positive regulation of metabolic process | IEP | HCCA |
BP | GO:0010557 | positive regulation of macromolecule biosynthetic process | IEP | HCCA |
BP | GO:0010604 | positive regulation of macromolecule metabolic process | IEP | HCCA |
BP | GO:0010608 | post-transcriptional regulation of gene expression | IEP | HCCA |
BP | GO:0010628 | positive regulation of gene expression | IEP | HCCA |
MF | GO:0016462 | pyrophosphatase activity | IEP | HCCA |
MF | GO:0016787 | hydrolase activity | IEP | HCCA |
MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | HCCA |
MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | HCCA |
MF | GO:0016887 | ATP hydrolysis activity | IEP | HCCA |
MF | GO:0017111 | ribonucleoside triphosphate phosphatase activity | IEP | HCCA |
BP | GO:0031325 | positive regulation of cellular metabolic process | IEP | HCCA |
BP | GO:0031328 | positive regulation of cellular biosynthetic process | IEP | HCCA |
BP | GO:0034248 | regulation of amide metabolic process | IEP | HCCA |
BP | GO:0034250 | positive regulation of amide metabolic process | IEP | HCCA |
MF | GO:0043021 | ribonucleoprotein complex binding | IEP | HCCA |
MF | GO:0043022 | ribosome binding | IEP | HCCA |
BP | GO:0043243 | positive regulation of protein-containing complex disassembly | IEP | HCCA |
BP | GO:0043244 | regulation of protein-containing complex disassembly | IEP | HCCA |
MF | GO:0044183 | protein folding chaperone | IEP | HCCA |
MF | GO:0044877 | protein-containing complex binding | IEP | HCCA |
MF | GO:0045182 | translation regulator activity | IEP | HCCA |
BP | GO:0045727 | positive regulation of translation | IEP | HCCA |
BP | GO:0045901 | positive regulation of translational elongation | IEP | HCCA |
BP | GO:0045905 | positive regulation of translational termination | IEP | HCCA |
BP | GO:0048518 | positive regulation of biological process | IEP | HCCA |
BP | GO:0048522 | positive regulation of cellular process | IEP | HCCA |
MF | GO:0051082 | unfolded protein binding | IEP | HCCA |
BP | GO:0051128 | regulation of cellular component organization | IEP | HCCA |
BP | GO:0051130 | positive regulation of cellular component organization | IEP | HCCA |
BP | GO:0051173 | positive regulation of nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0051246 | regulation of protein metabolic process | IEP | HCCA |
BP | GO:0051247 | positive regulation of protein metabolic process | IEP | HCCA |
MF | GO:0090079 | translation regulator activity, nucleic acid binding | IEP | HCCA |
MF | GO:0140657 | ATP-dependent activity | IEP | HCCA |
MF | GO:0140662 | ATP-dependent protein folding chaperone | IEP | HCCA |
BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001931 | Ribosomal_S21e | 24 | 99 |
No external refs found! |