Aop_g23096

Description : component *(eS21) of small ribosomal-subunit (SSU) proteome & original description: none

Gene families : OG0004049 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004049_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aop_g23096

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00016p00256280	evm_27.TU.AmTr_v1...	Protein biosynthesis.cytosolic ribosome.small subunit...	0.02	OrthoFinder output from all 47 species
AMTR_s00045p00200410	evm_27.TU.AmTr_v1...	Protein biosynthesis.cytosolic ribosome.small subunit...	0.06	OrthoFinder output from all 47 species
AT3G53890	No alias	Ribosomal protein S21e	0.04	OrthoFinder output from all 47 species
AT5G27700	No alias	Ribosomal protein S21e	0.06	OrthoFinder output from all 47 species
Als_g29961	No alias	component *(eS21) of small ribosomal-subunit (SSU)...	0.04	OrthoFinder output from all 47 species
Azfi_s0022.g016110	No alias	component *(eS21) of small ribosomal-subunit (SSU)...	0.04	OrthoFinder output from all 47 species
Azfi_s0185.g056623	No alias	component *(eS21) of small ribosomal-subunit (SSU)...	0.04	OrthoFinder output from all 47 species
Azfi_s2932.g113764	No alias	component *(eS21) of small ribosomal-subunit (SSU)...	0.05	OrthoFinder output from all 47 species
Cba_g37485	No alias	component *(eS21) of small ribosomal-subunit (SSU)...	0.05	OrthoFinder output from all 47 species
Cba_g46482	No alias	component *(eS21) of small ribosomal-subunit (SSU)...	0.01	OrthoFinder output from all 47 species
Ceric.37G056600.1	Ceric.37G056600	component *(eS21) of small ribosomal-subunit (SSU)...	0.03	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00020780.14	No alias	Protein biosynthesis.cytosolic ribosome.small subunit...	0.01	OrthoFinder output from all 47 species
Cre03.g203450	No alias	Protein biosynthesis.cytosolic ribosome.small subunit...	0.1	OrthoFinder output from all 47 species
Dcu_g35214	No alias	component *(eS21) of small ribosomal-subunit (SSU)...	0.04	OrthoFinder output from all 47 species
Dcu_g44956	No alias	component *(eS21) of small ribosomal-subunit (SSU)...	0.03	OrthoFinder output from all 47 species
Dde_g15855	No alias	component *(eS21) of small ribosomal-subunit (SSU)...	0.03	OrthoFinder output from all 47 species
GSVIVT01017756001	No alias	Protein biosynthesis.cytosolic ribosome.small subunit...	0.08	OrthoFinder output from all 47 species
GSVIVT01031151001	No alias	Protein biosynthesis.cytosolic ribosome.small subunit...	0.06	OrthoFinder output from all 47 species
Gb_27652	No alias	component RPS21 of SSU proteome	0.04	OrthoFinder output from all 47 species
Gb_35516	No alias	component RPS21 of SSU proteome	0.06	OrthoFinder output from all 47 species
LOC_Os03g46490.1	LOC_Os03g46490	component RPS21 of SSU proteome	0.04	OrthoFinder output from all 47 species
MA_73657g0010	No alias	component RPS21 of SSU proteome	0.03	OrthoFinder output from all 47 species
Mp4g22150.1	No alias	component RPS21 of SSU proteome	0.08	OrthoFinder output from all 47 species
Ore_g39678	No alias	component *(eS21) of small ribosomal-subunit (SSU)...	0.03	OrthoFinder output from all 47 species
Pnu_g15530	No alias	component *(eS21) of small ribosomal-subunit (SSU)...	0.02	OrthoFinder output from all 47 species
Pp3c26_3000V3.1	Pp3c26_3000	Ribosomal protein S21e	0.06	OrthoFinder output from all 47 species
Sam_g07802	No alias	component *(eS21) of small ribosomal-subunit (SSU)...	0.05	OrthoFinder output from all 47 species
Sam_g07803	No alias	component *(eS21) of small ribosomal-subunit (SSU)...	0.04	OrthoFinder output from all 47 species
Smo271040	No alias	Protein biosynthesis.cytosolic ribosome.small subunit...	0.05	OrthoFinder output from all 47 species
Solyc01g066840.3.1	Solyc01g066840	component RPS21 of SSU proteome	0.04	OrthoFinder output from all 47 species
Solyc04g074910.3.1	Solyc04g074910	component RPS21 of SSU proteome	0.03	OrthoFinder output from all 47 species
Spa_g19976	No alias	component *(eS21) of small ribosomal-subunit (SSU)...	0.06	OrthoFinder output from all 47 species
Zm00001e001637_P002	Zm00001e001637	component RPS21 of SSU proteome	0.08	OrthoFinder output from all 47 species
Zm00001e011684_P002	Zm00001e011684	component RPS21 of SSU proteome	0.06	OrthoFinder output from all 47 species
Zm00001e031393_P002	Zm00001e031393	component RPS21 of SSU proteome	0.06	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003723	RNA binding	IEP	HCCA
MF	GO:0003746	translation elongation factor activity	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA
BP	GO:0006417	regulation of translation	IEP	HCCA
BP	GO:0006448	regulation of translational elongation	IEP	HCCA
BP	GO:0006449	regulation of translational termination	IEP	HCCA
BP	GO:0006457	protein folding	IEP	HCCA
MF	GO:0008135	translation factor activity, RNA binding	IEP	HCCA
MF	GO:0008237	metallopeptidase activity	IEP	HCCA
BP	GO:0009891	positive regulation of biosynthetic process	IEP	HCCA
BP	GO:0009893	positive regulation of metabolic process	IEP	HCCA
BP	GO:0010557	positive regulation of macromolecule biosynthetic process	IEP	HCCA
BP	GO:0010604	positive regulation of macromolecule metabolic process	IEP	HCCA
BP	GO:0010608	post-transcriptional regulation of gene expression	IEP	HCCA
BP	GO:0010628	positive regulation of gene expression	IEP	HCCA
MF	GO:0016462	pyrophosphatase activity	IEP	HCCA
MF	GO:0016787	hydrolase activity	IEP	HCCA
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	IEP	HCCA
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	IEP	HCCA
MF	GO:0016887	ATP hydrolysis activity	IEP	HCCA
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	IEP	HCCA
BP	GO:0031325	positive regulation of cellular metabolic process	IEP	HCCA
BP	GO:0031328	positive regulation of cellular biosynthetic process	IEP	HCCA
BP	GO:0034248	regulation of amide metabolic process	IEP	HCCA
BP	GO:0034250	positive regulation of amide metabolic process	IEP	HCCA
MF	GO:0043021	ribonucleoprotein complex binding	IEP	HCCA
MF	GO:0043022	ribosome binding	IEP	HCCA
BP	GO:0043243	positive regulation of protein-containing complex disassembly	IEP	HCCA
BP	GO:0043244	regulation of protein-containing complex disassembly	IEP	HCCA
MF	GO:0044183	protein folding chaperone	IEP	HCCA
MF	GO:0044877	protein-containing complex binding	IEP	HCCA
MF	GO:0045182	translation regulator activity	IEP	HCCA
BP	GO:0045727	positive regulation of translation	IEP	HCCA
BP	GO:0045901	positive regulation of translational elongation	IEP	HCCA
BP	GO:0045905	positive regulation of translational termination	IEP	HCCA
BP	GO:0048518	positive regulation of biological process	IEP	HCCA
BP	GO:0048522	positive regulation of cellular process	IEP	HCCA
MF	GO:0051082	unfolded protein binding	IEP	HCCA
BP	GO:0051128	regulation of cellular component organization	IEP	HCCA
BP	GO:0051130	positive regulation of cellular component organization	IEP	HCCA
BP	GO:0051173	positive regulation of nitrogen compound metabolic process	IEP	HCCA
BP	GO:0051246	regulation of protein metabolic process	IEP	HCCA
BP	GO:0051247	positive regulation of protein metabolic process	IEP	HCCA
MF	GO:0090079	translation regulator activity, nucleic acid binding	IEP	HCCA
MF	GO:0140657	ATP-dependent activity	IEP	HCCA
MF	GO:0140662	ATP-dependent protein folding chaperone	IEP	HCCA
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001931	Ribosomal_S21e	24	99

External Links

No external refs found!

Aop_g23096

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation