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  5. Aop_g22484

Aop_g22484 (ATCLC-C, CLC-C)


Aliases : ATCLC-C, CLC-C

Description : anion channel / anion:proton antiporter *(CLC) & original description: none


Gene families : OG0000501 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000501_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g22484
Cluster HCCA: Cluster_301

Target Alias Description ECC score Gene Family Method Actions
AT5G33280 No alias Voltage-gated chloride channel family protein 0.05 OrthoFinder output from all 47 species
Ala_g06811 ATCLC-C, CLC-C anion channel / anion:proton antiporter *(CLC) &... 0.03 OrthoFinder output from all 47 species
Ceric.01G063300.1 ATCLC-C, CLC-C,... anion channel / anion:proton antiporter *(CLC) &... 0.03 OrthoFinder output from all 47 species
Ceric.03G016200.1 CLC-D, ATCLC-D,... anion channel / anion:proton antiporter *(CLC) &... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000057.10 ATCLC-F, CLCF, CLC-F Chloride channel protein CLC-d OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001126.4 No alias Chloride channel protein CLC-c OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Cre09.g402051 ATCLC-B, CLC-B Chloride channel protein CLC-b OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Dac_g16210 ATCLC-C, CLC-C anion channel / anion:proton antiporter *(CLC) &... 0.03 OrthoFinder output from all 47 species
GSVIVT01000264001 ATCLC-C, CLC-C Solute transport.carrier-mediated transport.CLC anion... 0.03 OrthoFinder output from all 47 species
Gb_06773 No alias anion channel / anion:proton antiporter (CLC) 0.03 OrthoFinder output from all 47 species
Nbi_g24849 ATCLC-B, CLC-B not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g32978 ATCLC-C, CLC-C anion channel / anion:proton antiporter *(CLC) &... 0.02 OrthoFinder output from all 47 species
Pnu_g01742 ATCLC-C, CLC-C anion channel / anion:proton antiporter *(CLC) &... 0.03 OrthoFinder output from all 47 species
Ppi_g61152 ATCLC-C, CLC-C anion channel / anion:proton antiporter *(CLC) &... 0.05 OrthoFinder output from all 47 species
Smo100906 ATCLC-C, CLC-C Solute transport.carrier-mediated transport.CLC anion... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005247 voltage-gated chloride channel activity IEA Interproscan
BP GO:0006821 chloride transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0009072 aromatic amino acid metabolic process IEP HCCA
BP GO:0009073 aromatic amino acid family biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
InterPro domains Description Start Stop
IPR000644 CBS_dom 721 769
IPR000644 CBS_dom 617 674
IPR001807 Cl-channel_volt-gated 167 584
No external refs found!