Aop_g22073

Description : not classified & original description: none

Gene families : OG0002898 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002898_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aop_g22073
Cluster	HCCA: Cluster_27

Target	Alias	Description	ECC score	Gene Family Method
Adi_g059339	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g08127	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Als_g16114	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g04647	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g29055	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.13G081400.1	Ceric.13G081400	not classified & original description: pacid=50635650...	0.03	OrthoFinder output from all 47 species
Dcu_g08195	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Dde_g28999	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
MA_73880g0010	No alias	transcription factor (GeBP)	0.02	OrthoFinder output from all 47 species
Ppi_g57164	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0129.g021977	No alias	not classified & original description: CDS=1-1806	0.05	OrthoFinder output from all 47 species
Sam_g10172	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g10173	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g15681	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Tin_g08710	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	HCCA
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0004518	nuclease activity	IEP	HCCA
MF	GO:0004540	ribonuclease activity	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
MF	GO:0005524	ATP binding	IEP	HCCA
BP	GO:0006397	mRNA processing	IEP	HCCA
BP	GO:0016071	mRNA metabolic process	IEP	HCCA
MF	GO:0017076	purine nucleotide binding	IEP	HCCA
MF	GO:0030554	adenyl nucleotide binding	IEP	HCCA
MF	GO:0031072	heat shock protein binding	IEP	HCCA
BP	GO:0031123	RNA 3'-end processing	IEP	HCCA
BP	GO:0031124	mRNA 3'-end processing	IEP	HCCA
MF	GO:0032553	ribonucleotide binding	IEP	HCCA
MF	GO:0032555	purine ribonucleotide binding	IEP	HCCA
MF	GO:0032559	adenyl ribonucleotide binding	IEP	HCCA
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	HCCA
MF	GO:0036094	small molecule binding	IEP	HCCA
MF	GO:0043167	ion binding	IEP	HCCA
MF	GO:0043168	anion binding	IEP	HCCA
MF	GO:0051082	unfolded protein binding	IEP	HCCA
MF	GO:0097159	organic cyclic compound binding	IEP	HCCA
MF	GO:0097367	carbohydrate derivative binding	IEP	HCCA
MF	GO:0140098	catalytic activity, acting on RNA	IEP	HCCA
MF	GO:1901265	nucleoside phosphate binding	IEP	HCCA
MF	GO:1901363	heterocyclic compound binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR007592	GEBP	322	422

External Links

No external refs found!

Aop_g22073

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation