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  5. Aop_g22046

Aop_g22046 (SUF4)


Aliases : SUF4

Description : FLC-binding component *(SUF4) of FRI-C transcription effector complex & original description: none


Gene families : OG0002334 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002334_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g22046
Cluster HCCA: Cluster_19

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00011p00256770 SUF4,... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 OrthoFinder output from all 47 species
Ceric.18G072400.1 SUF4, Ceric.18G072400 FLC-binding component *(SUF4) of FRI-C transcription... 0.03 OrthoFinder output from all 47 species
Ceric.31G034100.1 SUF4, Ceric.31G034100 FLC-binding component *(SUF4) of FRI-C transcription... 0.05 OrthoFinder output from all 47 species
Cre06.g305200 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 OrthoFinder output from all 47 species
Dcu_g22754 SUF4 FLC-binding component *(SUF4) of FRI-C transcription... 0.02 OrthoFinder output from all 47 species
Dcu_g23742 SUF4 FLC-binding component *(SUF4) of FRI-C transcription... 0.02 OrthoFinder output from all 47 species
MA_10435270g0010 SUF4 C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Ore_g03322 SUF4 FLC-binding component *(SUF4) of FRI-C transcription... 0.02 OrthoFinder output from all 47 species
Solyc02g032120.3.1 SUF4, Solyc02g032120 C2H2 zinc finger transcription factor 0.04 OrthoFinder output from all 47 species
Solyc02g081620.3.1 SUF4, Solyc02g081620 C2H2 zinc finger transcription factor 0.04 OrthoFinder output from all 47 species
Spa_g16449 SUF4 FLC-binding component *(SUF4) of FRI-C transcription... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
BP GO:0006457 protein folding IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!