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  5. Aop_g21829

Aop_g21829 (EBS)


Aliases : EBS

Description : component *(SHL/EBS) of PRC1 complex & original description: none


Gene families : OG0000671 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000671_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g21829
Cluster HCCA: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
Ceric.06G075800.1 EBS, Ceric.06G075800 component *(SHL/EBS) of PRC1 complex & original... 0.03 OrthoFinder output from all 47 species
MA_10430427g0010 EBS component BAH of BAH-EMF1 Polycomb silencing complex 0.02 OrthoFinder output from all 47 species
Nbi_g02865 EBS component *(SHL/EBS) of PRC1 complex & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g19660 EBS component *(SHL/EBS) of PRC1 complex & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0029.g010228 EBS component *(SHL/EBS) of PRC1 complex & original... 0.02 OrthoFinder output from all 47 species
Sam_g10852 No alias component *(SHL/EBS) of PRC1 complex & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g25015 EBS component *(SHL/EBS) of PRC1 complex & original description: none 0.01 OrthoFinder output from all 47 species
Zm00001e022395_P003 EBS, Zm00001e022395 component BAH of BAH-EMF1 Polycomb silencing complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005789 endoplasmic reticulum membrane IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007029 endoplasmic reticulum organization IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR019787 Znf_PHD-finger 140 183
IPR001025 BAH_dom 23 135
No external refs found!