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  5. Aop_g21746

Aop_g21746


Description : not classified & original description: none


Gene families : OG0001462 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001462_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g21746

Target Alias Description ECC score Gene Family Method Actions
Adi_g010683 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g10114 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aspi01Gene09601.t1 Aspi01Gene09601 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g17780 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
GSVIVT01009373001 No alias No description available 0.03 OrthoFinder output from all 47 species
Lfl_g40129 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10435887g0010 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Nbi_g00842 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g15876 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g10659 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g02898 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc12g088440.2.1 Solyc12g088440 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Zm00001e000723_P002 Zm00001e000723 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
BP GO:0048193 Golgi vesicle transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0003839 gamma-glutamylcyclotransferase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006575 cellular modified amino acid metabolic process IEP HCCA
BP GO:0006749 glutathione metabolic process IEP HCCA
BP GO:0006751 glutathione catabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016840 carbon-nitrogen lyase activity IEP HCCA
MF GO:0016842 amidine-lyase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0042219 cellular modified amino acid catabolic process IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0043171 peptide catabolic process IEP HCCA
BP GO:0044273 sulfur compound catabolic process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR015260 Syntaxin-6_N 11 108
No external refs found!