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  5. Aop_g21487

Aop_g21487


Description : component *(U11-48K) of U11 snRNP complex & original description: none


Gene families : OG0006105 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006105_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g21487

Target Alias Description ECC score Gene Family Method Actions
AT3G04160 No alias unknown protein; Has 1711 Blast hits to 1353 proteins in... 0.02 OrthoFinder output from all 47 species
Als_g27910 No alias component *(U11-48K) of U11 snRNP complex & original... 0.03 OrthoFinder output from all 47 species
Aob_g13397 No alias component *(U11-48K) of U11 snRNP complex & original... 0.02 OrthoFinder output from all 47 species
Gb_01181 No alias protein factor U11-48K of U11 small nuclear... 0.02 OrthoFinder output from all 47 species
Msp_g31273 No alias component *(U11-48K) of U11 snRNP complex & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!