Aop_g20934 (PUB26)

Aliases : PUB26

Description : U-Box-group-III E3 ubiquitin ligase & original description: none

Gene families : OG0000127 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000127_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aop_g20934

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00001p00199950	evm_27.TU.AmTr_v1...	U-box domain-containing protein 31 OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
AT3G52450	PUB22	plant U-box 22	0.03	OrthoFinder output from all 47 species
Als_g12715	PUB25	U-Box-group-III E3 ubiquitin ligase & original description: none	0.02	OrthoFinder output from all 47 species
Als_g28879	PUB26	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene15674.t1	PUB26, Aspi01Gene15674	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene17992.t1	PUB25, Aspi01Gene17992	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene18452.t1	PUB25, Aspi01Gene18452	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene18453.t1	PUB25, Aspi01Gene18453	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene33499.t1	PUB25, Aspi01Gene33499	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene44328.t1	PUB23, Aspi01Gene44328	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Cba_g16814	PUB26	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ceric.08G030400.1	PUB26, Ceric.08G030400	U-Box-group-III E3 ubiquitin ligase & original...	0.03	OrthoFinder output from all 47 species
Dac_g00903	PUB26	U-Box-group-III E3 ubiquitin ligase & original description: none	0.03	OrthoFinder output from all 47 species
Dac_g10662	PUB25	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g02942	PUB26	U-Box-group-III E3 ubiquitin ligase & original description: none	0.04	OrthoFinder output from all 47 species
Dcu_g26825	PUB26	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ehy_g06700	PUB26	U-Box-group-III E3 ubiquitin ligase & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g18076	PUB25	E3 ubiquitin ligase & original description: none	0.02	OrthoFinder output from all 47 species
LOC_Os02g50460.1	LOC_Os02g50460	U-box domain-containing protein 20 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
LOC_Os04g34030.1	PUB23, LOC_Os04g34030	E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis...	0.05	OrthoFinder output from all 47 species
LOC_Os12g06410.1	PUB24, LOC_Os12g06410	E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Len_g31416	PUB23	not classified & original description: none	0.03	OrthoFinder output from all 47 species
MA_10432179g0010	PUB22	E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
MA_200041g0010	PUB25	U-box domain-containing protein 25 OS=Arabidopsis...	0.04	OrthoFinder output from all 47 species
MA_5536318g0010	No alias	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Mp3g01700.1	PUB23	E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis...	0.04	OrthoFinder output from all 47 species
Mp7g11020.1	PUB25	E3 ubiquitin ligase (PUB)	0.03	OrthoFinder output from all 47 species
Nbi_g06628	PUB25	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pp3c4_20710V3.1	PUB26, Pp3c4_20710	plant U-box 25	0.01	OrthoFinder output from all 47 species
Solyc01g007010.2.1	PUB22, Solyc01g007010	E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Solyc01g007020.4.1	PUB23, Solyc01g007020	E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Solyc01g007040.4.1	PUB22, Solyc01g007040	E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Solyc01g009330.1.1	PUB22, Solyc01g009330	E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Solyc01g107980.3.1	PUB26, Solyc01g107980	U-box domain-containing protein 25 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Solyc04g077610.4.1	Solyc04g077610	U-box domain-containing protein 30 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Solyc11g006030.1.1	Solyc11g006030	U-box domain-containing protein 21 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
Solyc11g068940.1.1	PUB24, Solyc11g068940	E3 ubiquitin-protein ligase PUB24 OS=Arabidopsis...	0.04	OrthoFinder output from all 47 species
Zm00001e008167_P001	PUB23, Zm00001e008167	E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Zm00001e022698_P001	PUB26, Zm00001e022698	U-box domain-containing protein 25 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0016567	protein ubiquitination	IEA	Interproscan
MF	GO:0016740	transferase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
BP	GO:0032446	protein modification by small protein conjugation	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0004518	nuclease activity	IEP	HCCA
MF	GO:0004672	protein kinase activity	IEP	HCCA
MF	GO:0005085	guanyl-nucleotide exchange factor activity	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA
BP	GO:0006468	protein phosphorylation	IEP	HCCA
BP	GO:0006793	phosphorus metabolic process	IEP	HCCA
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	HCCA
BP	GO:0006996	organelle organization	IEP	HCCA
BP	GO:0007010	cytoskeleton organization	IEP	HCCA
MF	GO:0008017	microtubule binding	IEP	HCCA
MF	GO:0015631	tubulin binding	IEP	HCCA
MF	GO:0016301	kinase activity	IEP	HCCA
BP	GO:0016310	phosphorylation	IEP	HCCA
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	HCCA
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	HCCA
MF	GO:0030234	enzyme regulator activity	IEP	HCCA
MF	GO:0030695	GTPase regulator activity	IEP	HCCA
MF	GO:0060589	nucleoside-triphosphatase regulator activity	IEP	HCCA
MF	GO:0098772	molecular function regulator activity	IEP	HCCA
MF	GO:0140677	molecular function activator activity	IEP	HCCA
MF	GO:0140678	molecular function inhibitor activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003613	Ubox_domain	18	89

External Links

No external refs found!

Aop_g20934 (PUB26)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation