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  5. Aop_g20559

Aop_g20559


Description : not classified & original description: none


Gene families : OG0001631 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001631_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g20559
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00174150 evm_27.TU.AmTr_v1... Cell wall.hemicellulose.xylan.modification and... 0.02 OrthoFinder output from all 47 species
AMTR_s00099p00012720 evm_27.TU.AmTr_v1... Cell wall.hemicellulose.xylan.modification and... 0.04 OrthoFinder output from all 47 species
AT1G09610 No alias Protein of unknown function (DUF579) 0.04 OrthoFinder output from all 47 species
AT1G33800 No alias Protein of unknown function (DUF579) 0.04 OrthoFinder output from all 47 species
AT3G50220 No alias Protein of unknown function (DUF579) 0.04 OrthoFinder output from all 47 species
AT5G67210 No alias Protein of unknown function (DUF579) 0.05 OrthoFinder output from all 47 species
Adi_g009283 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05404 No alias glucuronoxylan 4-O-methyltransferase & original description: none 0.09 OrthoFinder output from all 47 species
Aop_g14287 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.33G017200.1 Ceric.33G017200 not classified & original description: pacid=50606579... 0.03 OrthoFinder output from all 47 species
Ceric.38G045400.1 Ceric.38G045400 not classified & original description: pacid=50579776... 0.03 OrthoFinder output from all 47 species
Dac_g00741 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g15361 No alias glucuronoxylan 4-O-methyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01004862001 No alias Cell wall.hemicellulose.xylan.modification and... 0.02 OrthoFinder output from all 47 species
GSVIVT01023221001 No alias Glucuronoxylan 4-O-methyltransferase 3 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Gb_12265 No alias glucuronoxylan 4-O-methyltransferase 0.03 OrthoFinder output from all 47 species
Gb_31046 No alias glucuronoxylan 4-O-methyltransferase 0.04 OrthoFinder output from all 47 species
Gb_35413 No alias Protein IRX15-LIKE OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os02g06380.1 LOC_Os02g06380 Protein IRX15-LIKE OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os04g55640.1 LOC_Os04g55640 Protein IRX15-LIKE OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os06g47310.1 LOC_Os06g47310 Protein IRX15-LIKE OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os11g13870.1 LOC_Os11g13870 Glucuronoxylan 4-O-methyltransferase 2 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Len_g03184 No alias glucuronoxylan 4-O-methyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Len_g30914 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g35377 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
MA_10430239g0010 No alias glucuronoxylan 4-O-methyltransferase 0.03 OrthoFinder output from all 47 species
MA_195978g0010 No alias Probable methyltransferase At1g27930 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Msp_g12991 No alias glucuronoxylan 4-O-methyltransferase & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g00402 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g13104 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g16934 No alias glucuronoxylan 4-O-methyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g29128 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g18981 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g01166 No alias glucuronoxylan 4-O-methyltransferase & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0099.g019581 No alias not classified & original description: CDS=1-867 0.04 OrthoFinder output from all 47 species
Smo57632 No alias Glucuronoxylan 4-O-methyltransferase 1 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Solyc01g103360.4.1 Solyc01g103360 glucuronoxylan 4-O-methyltransferase 0.03 OrthoFinder output from all 47 species
Solyc02g064945.1.1 Solyc02g064945 Protein IRX15-LIKE OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc05g015497.1.1 Solyc05g015497 Probable methyltransferase At1g27930 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Solyc07g015920.3.1 Solyc07g015920 Probable methyltransferase At1g27930 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Spa_g05421 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g24624 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g30525 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g09822 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e011047_P001 Zm00001e011047 Glucuronoxylan 4-O-methyltransferase 2 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e013082_P001 Zm00001e013082 Protein IRX15-LIKE OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e013688_P001 Zm00001e013688 Protein IRX15-LIKE OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e039770_P002 Zm00001e039770 glucuronoxylan 4-O-methyltransferase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP HCCA
MF GO:0004097 catechol oxidase activity IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP HCCA
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
InterPro domains Description Start Stop
IPR021148 Polysacc_synth_dom 1 185
No external refs found!