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  5. Aop_g20456

Aop_g20456 (CH1, ATCAO, CAO)


Aliases : CH1, ATCAO, CAO

Description : chlorophyllide a oxygenase *(CAO) & original description: none


Gene families : OG0002291 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002291_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g20456
Cluster HCCA: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
AT1G44446 CH1, ATCAO, CAO Pheophorbide a oxygenase family protein with Rieske... 0.04 OrthoFinder output from all 47 species
Aob_g07332 CH1, ATCAO, CAO chlorophyllide a oxygenase *(CAO) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.12G013500.1 CH1, ATCAO, CAO,... chlorophyllide a oxygenase *(CAO) & original... 0.03 OrthoFinder output from all 47 species
Ceric.13G051300.1 CH1, ATCAO, CAO,... chlorophyllide a oxygenase *(CAO) & original... 0.05 OrthoFinder output from all 47 species
Cre01.g043350 CH1, ATCAO, CAO Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll... 0.02 OrthoFinder output from all 47 species
Dac_g16203 CH1, ATCAO, CAO chlorophyllide a oxygenase *(CAO) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g09026 CH1, ATCAO, CAO chlorophyllide a oxygenase *(CAO) & original description: none 0.05 OrthoFinder output from all 47 species
MA_10219914g0020 CH1, ATCAO, CAO chlorophyllide a oxygenase 0.04 OrthoFinder output from all 47 species
MA_10432239g0010 CH1, ATCAO, CAO chlorophyllide a oxygenase 0.03 OrthoFinder output from all 47 species
Mp4g21140.1 CH1, ATCAO, CAO chlorophyllide a oxygenase 0.05 OrthoFinder output from all 47 species
Nbi_g11773 CH1, ATCAO, CAO chlorophyllide a oxygenase *(CAO) & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g11774 CH1, ATCAO, CAO chlorophyllide a oxygenase *(CAO) & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g34262 CH1, ATCAO, CAO chlorophyllide a oxygenase *(CAO) & original description: none 0.1 OrthoFinder output from all 47 species
Spa_g06872 CH1, ATCAO, CAO chlorophyllide a oxygenase *(CAO) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g16328 CH1, ATCAO, CAO chlorophyllide a oxygenase *(CAO) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g21850 CH1, ATCAO, CAO chlorophyllide a oxygenase *(CAO) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e018558_P002 CH1, ATCAO, CAO,... chlorophyllide a oxygenase 0.03 OrthoFinder output from all 47 species
Zm00001e028282_P003 CH1, ATCAO, CAO,... chlorophyllide a oxygenase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0051537 2 iron, 2 sulfur cluster binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005575 cellular_component IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009538 photosystem I reaction center IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0030145 manganese ion binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
InterPro domains Description Start Stop
IPR013626 PaO 480 575
IPR017941 Rieske_2Fe-2S 293 376
No external refs found!