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  5. Aop_g20279

Aop_g20279


Description : not classified & original description: none


Gene families : OG0000811 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000811_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g20279
Cluster HCCA: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00209400 evm_27.TU.AmTr_v1... CASP-like protein 2C1 OS=Sorghum bicolor 0.07 OrthoFinder output from all 47 species
AMTR_s00028p00153320 evm_27.TU.AmTr_v1... CASP-like protein 2B1 OS=Vitis vinifera 0.03 OrthoFinder output from all 47 species
AMTR_s00037p00155660 evm_27.TU.AmTr_v1... CASP-like protein 2D1 OS=Vitis vinifera 0.04 OrthoFinder output from all 47 species
AMTR_s00131p00032340 evm_27.TU.AmTr_v1... CASP-like protein 2A1 OS=Oryza sativa subsp. japonica 0.03 OrthoFinder output from all 47 species
AT3G14380 No alias Uncharacterised protein family (UPF0497) 0.06 OrthoFinder output from all 47 species
Adi_g005547 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Adi_g031098 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Adi_g115376 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g01355 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g57052 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g58918 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g17065 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g14655 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g27416 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene18231.t1 Aspi01Gene18231 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene33412.t1 Aspi01Gene33412 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0034.g025274 No alias not classified & original description: CDS=467-1165 0.03 OrthoFinder output from all 47 species
Azfi_s0045.g030020 No alias not classified & original description: CDS=85-666 0.03 OrthoFinder output from all 47 species
Azfi_s0381.g067386 No alias not classified & original description: CDS=336-929 0.04 OrthoFinder output from all 47 species
Ceric.02G018700.1 Ceric.02G018700 not classified & original description: pacid=50584078... 0.11 OrthoFinder output from all 47 species
Ceric.08G055900.1 Ceric.08G055900 not classified & original description: pacid=50637769... 0.05 OrthoFinder output from all 47 species
Ceric.23G007600.1 Ceric.23G007600 not classified & original description: pacid=50611535... 0.07 OrthoFinder output from all 47 species
Dac_g09088 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Dac_g29525 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g45174 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g46991 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Dde_g01295 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g29089 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ehy_g00472 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ehy_g04283 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
LOC_Os06g44610.1 LOC_Os06g44610 CASP-like protein 2C1 OS=Oryza sativa subsp. japonica... 0.05 OrthoFinder output from all 47 species
LOC_Os12g32970.1 LOC_Os12g32970 CASP-like protein 2B1 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Len_g04097 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g15691 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Lfl_g06445 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10431555g0010 No alias CASP-like protein 2A3 OS=Picea sitchensis... 0.02 OrthoFinder output from all 47 species
Mp5g15430.1 No alias CASP-like protein 2U1 OS=Marchantia polymorpha... 0.07 OrthoFinder output from all 47 species
Msp_g06627 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g15117 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g04612 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g28679 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g30726 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g39866 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g40267 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g41718 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g06376 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g10053 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Ppi_g29949 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g29950 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g52434 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0018.g007556 No alias not classified & original description: CDS=113-772 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0058.g014965 No alias not classified & original description: CDS=570-1202 0.04 OrthoFinder output from all 47 species
Sam_g14499 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g17546 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g24648 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g27704 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g47684 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g47686 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Smo418756 No alias CASP-like protein 2U8 OS=Selaginella moellendorffii 0.03 OrthoFinder output from all 47 species
Smo439258 No alias SCA7 domain-containing protein SELMODRAFT_439258... 0.03 OrthoFinder output from all 47 species
Solyc05g054190.4.1 Solyc05g054190 CASP-like protein 2B1 OS=Vitis vinifera... 0.02 OrthoFinder output from all 47 species
Solyc07g006855.2.1 Solyc07g006855 CASP-like protein 2C1 OS=Populus trichocarpa... 0.04 OrthoFinder output from all 47 species
Solyc07g056040.3.1 Solyc07g056040 CASP-like protein 2A1 OS=Vitis vinifera... 0.05 OrthoFinder output from all 47 species
Solyc12g005070.2.1 Solyc12g005070 CASP-like protein 2D1 OS=Vitis vinifera... 0.03 OrthoFinder output from all 47 species
Spa_g00241 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Spa_g16154 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Tin_g09459 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g30643 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g44832 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Zm00001e013801_P001 Zm00001e013801 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016790 thiolester hydrolase activity IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
InterPro domains Description Start Stop
IPR006702 CASP_dom 113 264
No external refs found!