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  5. Aop_g20061

Aop_g20061 (ATPURM, PUR5)


Aliases : ATPURM, PUR5

Description : aminoimidazole RN synthetase *(PUR5) & original description: none


Gene families : OG0005193 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005193_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g20061

Target Alias Description ECC score Gene Family Method Actions
Cba_g33839 ATPURM, PUR5 aminoimidazole RN synthetase *(PUR5) & original description: none 0.03 OrthoFinder output from all 47 species
Gb_36051 ATPURM, PUR5 aminoimidazole RN synthase 0.03 OrthoFinder output from all 47 species
Nbi_g05778 ATPURM, PUR5 aminoimidazole RN synthetase *(PUR5) & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c6_25750V3.1 ATPURM, PUR5, Pp3c6_25750 phosphoribosylformylglycinamidine cyclo-ligase,... 0.02 OrthoFinder output from all 47 species
Sam_g18006 No alias aminoimidazole RN synthetase *(PUR5) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g04469 ATPURM, PUR5 aminoimidazole RN synthetase *(PUR5) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e031296_P001 ATPURM, PUR5,... aminoimidazole RN synthase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000154 rRNA modification IEP HCCA
BP GO:0001510 RNA methylation IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0008649 rRNA methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
BP GO:0031167 rRNA methylation IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:0070037 rRNA (pseudouridine) methyltransferase activity IEP HCCA
BP GO:0070475 rRNA base methylation IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140102 catalytic activity, acting on a rRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR010918 PurM-like_C_dom 241 405
IPR016188 PurM-like_N 122 229
No external refs found!