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  5. Aop_g19984

Aop_g19984 (VFB1)


Aliases : VFB1

Description : substrate adaptor *(VFB) of SCF E3 ubiquitin ligase complex & original description: none


Gene families : OG0001029 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001029_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g19984
Cluster HCCA: Cluster_80

Target Alias Description ECC score Gene Family Method Actions
Aev_g02301 VFB3 substrate adaptor *(VFB) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Aob_g14932 VFB3 substrate adaptor *(VFB) of SCF E3 ubiquitin ligase... 0.05 OrthoFinder output from all 47 species
Aop_g07137 VFB3 substrate adaptor *(VFB) of SCF E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
Dde_g02819 VFB1 substrate adaptor *(VFB) of SCF E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
MA_10431537g0010 VFB3 Putative F-box/LRR-repeat protein 8 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_179294g0010 VFB4, SKIP2 component FBX of SCF E3 ubiquitin ligase complex 0.03 OrthoFinder output from all 47 species
MA_7431175g0010 VFB3 Putative F-box/LRR-repeat protein 8 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_9863496g0010 VFB1 component FBX of SCF E3 ubiquitin ligase complex 0.02 OrthoFinder output from all 47 species
Msp_g01594 VFB3 substrate adaptor *(VFB) of SCF E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
Msp_g15288 VFB3 substrate adaptor *(VFB) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004190 aspartic-type endopeptidase activity IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
MF GO:0070001 aspartic-type peptidase activity IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 126 147
IPR001810 F-box_dom 38 71
No external refs found!