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  5. Aop_g19318

Aop_g19318


Description : component *(COX6b) of cytochrome c oxidase complex & original description: none


Gene families : OG0001692 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001692_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g19318
Cluster HCCA: Cluster_314

Target Alias Description ECC score Gene Family Method Actions
AT1G22450 ATCOX6B2, COX6B cytochrome C oxidase 6B 0.03 OrthoFinder output from all 47 species
Azfi_s0388.g067601 ATCOX6B2, COX6B component *(COX6b) of cytochrome c oxidase complex &... 0.03 OrthoFinder output from all 47 species
Ceric.27G008400.1 Ceric.27G008400 component *(COX6b) of cytochrome c oxidase complex &... 0.02 OrthoFinder output from all 47 species
Cre06.g304350 ATCOX6B2, COX6B Cellular respiration.oxidative... 0.01 OrthoFinder output from all 47 species
Len_g32557 No alias component *(COX6b) of cytochrome c oxidase complex &... 0.03 OrthoFinder output from all 47 species
Msp_g28261 ATCOX6B2, COX6B component *(COX6b) of cytochrome c oxidase complex &... 0.04 OrthoFinder output from all 47 species
Solyc04g074550.4.1 ATCOX6B2, COX6B,... component COX6b of cytochrome c oxidase complex 0.02 OrthoFinder output from all 47 species
Spa_g17081 ATCOX6B2, COX6B component *(COX6b) of cytochrome c oxidase complex &... 0.06 OrthoFinder output from all 47 species
Spa_g31256 ATCOX6B2, COX6B component *(COX6b) of cytochrome c oxidase complex &... 0.01 OrthoFinder output from all 47 species
Tin_g27353 ATCOX6B2, COX6B component *(COX6b) of cytochrome c oxidase complex &... 0.03 OrthoFinder output from all 47 species
Zm00001e001884_P002 ATCOX6B2, COX6B,... component COX6b of cytochrome c oxidase complex 0.04 OrthoFinder output from all 47 species
Zm00001e037987_P004 ATCOX6B2, COX6B,... component COX6b of cytochrome c oxidase complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005739 mitochondrion IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
CC GO:0005741 mitochondrial outer membrane IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0016197 endosomal transport IEP HCCA
CC GO:0016272 prefoldin complex IEP HCCA
BP GO:0016482 cytosolic transport IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
CC GO:0017119 Golgi transport complex IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
CC GO:0030906 retromer, cargo-selective complex IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
CC GO:0031968 organelle outer membrane IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
BP GO:0042147 retrograde transport, endosome to Golgi IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR003213 Cyt_c_oxidase_su6B 105 164
No external refs found!