Aop_g19076 (CLC-E, ATCLC-E, CLCE)


Aliases : CLC-E, ATCLC-E, CLCE

Description : anion channel / anion:proton antiporter *(CLC) & original description: none


Gene families : OG0002475 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002475_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g19076

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00086940 CLC-E, ATCLC-E,... Solute transport.carrier-mediated transport.CLC anion... 0.02 OrthoFinder output from all 47 species
AT4G35440 CLC-E, ATCLC-E, CLCE chloride channel E 0.02 OrthoFinder output from all 47 species
Aob_g16306 CLC-E, ATCLC-E, CLCE anion channel / anion:proton antiporter *(CLC) &... 0.02 OrthoFinder output from all 47 species
Ceric.10G033900.1 CLC-E, ATCLC-E,... anion channel / anion:proton antiporter *(CLC) &... 0.02 OrthoFinder output from all 47 species
Ehy_g11972 CLC-E, ATCLC-E, CLCE anion channel / anion:proton antiporter *(CLC) &... 0.02 OrthoFinder output from all 47 species
Mp1g20640.1 CLC-E, ATCLC-E, CLCE anion channel / anion:proton antiporter (CLC) 0.02 OrthoFinder output from all 47 species
Nbi_g01393 CLC-E, ATCLC-E, CLCE anion channel / anion:proton antiporter *(CLC) &... 0.05 OrthoFinder output from all 47 species
Ore_g19490 CLC-E, ATCLC-E, CLCE anion channel / anion:proton antiporter *(CLC) &... 0.03 OrthoFinder output from all 47 species
Ppi_g33655 CLC-E, ATCLC-E, CLCE anion channel / anion:proton antiporter *(CLC) &... 0.03 OrthoFinder output from all 47 species
Spa_g11460 CLC-E, ATCLC-E, CLCE anion channel / anion:proton antiporter *(CLC) &... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005247 voltage-gated chloride channel activity IEA Interproscan
BP GO:0006821 chloride transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
InterPro domains Description Start Stop
IPR001807 Cl-channel_volt-gated 339 668
IPR000644 CBS_dom 848 895
IPR000644 CBS_dom 767 813
No external refs found!