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  5. Aop_g18173

Aop_g18173


Description : component *(NOC2) of ribosomal-subunit proteome nuclear export complexes & original description: none


Gene families : OG0004074 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004074_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g18173
Cluster HCCA: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
AT3G55510 RBL Noc2p family 0.03 OrthoFinder output from all 47 species
Ala_g07131 No alias component *(NOC2) of ribosomal-subunit proteome nuclear... 0.04 OrthoFinder output from all 47 species
Aob_g18678 No alias component *(NOC2) of ribosomal-subunit proteome nuclear... 0.03 OrthoFinder output from all 47 species
Cre09.g391652 No alias Nucleolar complex protein 2 homolog OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
GSVIVT01016319001 RBL Nucleolar complex protein 2 homolog OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01037396001 No alias Nucleolar complex protein 2 homolog OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
LOC_Os12g06610.1 RBL, LOC_Os12g06610 component NOC2 of ribosomal subunit nuclear export complexes 0.02 OrthoFinder output from all 47 species
Mp1g23860.1 No alias component NOC2 of ribosomal subunit nuclear export complexes 0.02 OrthoFinder output from all 47 species
Solyc02g081680.4.1 Solyc02g081680 component NOC2 of ribosomal subunit nuclear export complexes 0.02 OrthoFinder output from all 47 species
Spa_g12087 No alias component *(NOC2) of ribosomal-subunit proteome nuclear... 0.03 OrthoFinder output from all 47 species
Zm00001e009196_P001 RBL, Zm00001e009196 component NOC2 of ribosomal subunit nuclear export complexes 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000178 exosome (RNase complex) IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006801 superoxide metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0072593 reactive oxygen species metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1905354 exoribonuclease complex IEP HCCA
InterPro domains Description Start Stop
IPR005343 Noc2 381 674
No external refs found!