Aop_g17790


Description : not classified & original description: none


Gene families : OG0002890 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002890_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g17790
Cluster HCCA: Cluster_329

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00051400 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
Als_g05601 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g22193 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g32767 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.1Z092000.1 Ceric.1Z092000 not classified & original description: pacid=50628379... 0.03 OrthoFinder output from all 47 species
Ceric.27G023200.1 Ceric.27G023200 not classified & original description: pacid=50605964... 0.03 OrthoFinder output from all 47 species
Ceric.33G024700.1 Ceric.33G024700 not classified & original description: pacid=50606829... 0.02 OrthoFinder output from all 47 species
Dac_g10473 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g57040 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g25289 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g44372 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e012910_P002 Zm00001e012910 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e037889_P001 Zm00001e037889 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
MF GO:0071949 FAD binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!