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  5. Aop_g17650

Aop_g17650


Description : NSUN-group-IV rRNA methyltransferase & original description: none


Gene families : OG0007677 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007677_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g17650

Target Alias Description ECC score Gene Family Method Actions
Dac_g12666 No alias NSUN-group-IV rRNA methyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Smo412312 No alias No description available 0.03 OrthoFinder output from all 47 species
Zm00001e021538_P003 Zm00001e021538 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008168 methyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0017056 structural constituent of nuclear pore IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR002478 PUA 136 175
IPR001678 MeTrfase_RsmB/NOP2 436 524
IPR001678 MeTrfase_RsmB/NOP2 268 337
No external refs found!