1. Home
  2. Species
  3. Lygodium flexuosum
  4. Sequence
  5. Lfl_g10202

Lfl_g10202 (DegP10)


Aliases : DegP10

Description : protease *(Deg) & original description: none


Gene families : OG0000580 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000580_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g10202

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00088p00077590 DegP9,... Protein degradation.peptidase families.serine-type... 0.02 OrthoFinder output from all 47 species
Aob_g02064 DegP9 protease *(Deg) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene22832.t1 DegP10, Aspi01Gene22832 protease *(Deg) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.23G054200.1 DegP9, Ceric.23G054200 protease *(Deg) & original description: pacid=50610093... 0.03 OrthoFinder output from all 47 species
Nbi_g19502 DegP9 protease *(Deg) & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g09692 No alias protease *(Deg) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g16764 No alias protease *(Deg) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc12g062290.2.1 DegP9, Solyc12g062290 protease (Deg) 0.04 OrthoFinder output from all 47 species
Zm00001e031683_P001 DegP10, Zm00001e031683 protease (Deg) 0.01 OrthoFinder output from all 47 species
Zm00001e040416_P002 DEGP2, Zm00001e040416 protease (Deg) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR041517 DEGP_PDZ 452 596
No external refs found!