Aop_g15243

Description : not classified & original description: none

Gene families : OG0001722 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001722_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aop_g15243
Cluster	HCCA: Cluster_301

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00010p00262430	ATFTSH6, FTSH6,...	ATP-dependent zinc metalloprotease FTSH 6, chloroplastic...	0.02	OrthoFinder output from all 47 species
Dcu_g12670	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
GSVIVT01036484001	No alias	Probable inactive ATP-dependent zinc metalloprotease...	0.03	OrthoFinder output from all 47 species
Lfl_g04831	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Msp_g07153	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Nbi_g34642	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g14965	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g17712	FTSH8	component *(FtsH1/2/5/6/8) of FtsH plastidial protease...	0.02	OrthoFinder output from all 47 species
Solyc03g046340.3.1	Solyc03g046340	component FtsHi of protein translocation ATPase motor complex	0.02	OrthoFinder output from all 47 species
Zm00001e007868_P001	Zm00001e007868	component FtsHi of protein translocation ATPase motor complex	0.02	OrthoFinder output from all 47 species
Zm00001e030358_P003	VAR2, FTSH2,...	component FtsH1\|2\|5\|6\|8 of FtsH plastidial protease complexes	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATP hydrolysis activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0006396	RNA processing	IEP	HCCA
BP	GO:0006397	mRNA processing	IEP	HCCA
MF	GO:0008194	UDP-glycosyltransferase activity	IEP	HCCA
BP	GO:0016071	mRNA metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR041569	AAA_lid_3	629	666
IPR003959	ATPase_AAA_core	469	597

External Links

No external refs found!