Aop_g14503

Description : large subunit beta of AP-4 vacuole cargo adaptor complex & original description: none

Gene families : OG0001612 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001612_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aop_g14503

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00102p00095780	evm_27.TU.AmTr_v1...	Vesicle trafficking.clathrin coated vesicle (CCV)...	0.02	OrthoFinder output from all 47 species
AT4G23460	No alias	Adaptin family protein	0.03	OrthoFinder output from all 47 species
AT5G11490	No alias	adaptin family protein	0.04	OrthoFinder output from all 47 species
Als_g01131	No alias	large subunit beta of AP-4 vacuole cargo adaptor complex...	0.03	OrthoFinder output from all 47 species
Cba_g31750	No alias	large subunit beta of AP-1 trans-Golgi network cargo...	0.03	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00020592.38	No alias	Vesicle trafficking.clathrin coated vesicle (CCV)...	0.02	OrthoFinder output from all 47 species
Dac_g03831	No alias	large subunit beta of AP-1 trans-Golgi network cargo...	0.02	OrthoFinder output from all 47 species
Dcu_g07725	No alias	large subunit beta of AP-1 trans-Golgi network cargo...	0.04	OrthoFinder output from all 47 species
GSVIVT01019391001	No alias	Vesicle trafficking.clathrin coated vesicle (CCV)...	0.03	OrthoFinder output from all 47 species
GSVIVT01035675001	No alias	Vesicle trafficking.endomembrane trafficking.vacuolar...	0.03	OrthoFinder output from all 47 species
Gb_11857	No alias	large subunit beta of AP-1 trans-Golgi network cargo...	0.04	OrthoFinder output from all 47 species
LOC_Os01g43630.1	LOC_Os01g43630	large subunit beta of AP-4 vacuole cargo adaptor complex	0.04	OrthoFinder output from all 47 species
LOC_Os03g23950.1	LOC_Os03g23950	large subunit beta of AP-1 trans-Golgi network cargo...	0.05	OrthoFinder output from all 47 species
Lfl_g02298	No alias	large subunit beta of AP-1 trans-Golgi network cargo...	0.04	OrthoFinder output from all 47 species
Lfl_g05633	No alias	large subunit beta of AP-4 vacuole cargo adaptor complex...	0.05	OrthoFinder output from all 47 species
MA_10434151g0010	No alias	large subunit beta of AP-1 trans-Golgi network cargo...	0.02	OrthoFinder output from all 47 species
MA_10436050g0010	No alias	Beta-adaptin-like protein C OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
Ore_g36319	No alias	large subunit beta of AP-4 vacuole cargo adaptor complex...	0.02	OrthoFinder output from all 47 species
Smo269184	No alias	Vesicle trafficking.clathrin coated vesicle (CCV)...	0.03	OrthoFinder output from all 47 species
Smo269763	No alias	Vesicle trafficking.endomembrane trafficking.vacuolar...	0.04	OrthoFinder output from all 47 species
Solyc08g068210.3.1	Solyc08g068210	large subunit beta of AP-4 vacuole cargo adaptor complex	0.04	OrthoFinder output from all 47 species
Solyc08g081320.3.1	Solyc08g081320	large subunit beta of AP-1 trans-Golgi network cargo...	0.03	OrthoFinder output from all 47 species
Zm00001e001693_P001	Zm00001e001693	large subunit beta of AP-1 trans-Golgi network cargo...	0.04	OrthoFinder output from all 47 species
Zm00001e020411_P002	Zm00001e020411	large subunit beta of AP-4 vacuole cargo adaptor complex	0.03	OrthoFinder output from all 47 species
Zm00001e027916_P001	Zm00001e027916	large subunit beta of AP-4 vacuole cargo adaptor complex	0.06	OrthoFinder output from all 47 species
Zm00001e038184_P001	Zm00001e038184	large subunit beta of AP-1 trans-Golgi network cargo...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	IEA	Interproscan
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015031	protein transport	None	Extended
BP	GO:0016192	vesicle-mediated transport	IEA	Interproscan
CC	GO:0030119	AP-type membrane coat adaptor complex	None	Extended
CC	GO:0030131	clathrin adaptor complex	IEA	Interproscan
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000145	exocyst	IEP	HCCA
BP	GO:0000278	mitotic cell cycle	IEP	HCCA
MF	GO:0000287	magnesium ion binding	IEP	HCCA
CC	GO:0000775	chromosome, centromeric region	IEP	HCCA
MF	GO:0004417	hydroxyethylthiazole kinase activity	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA
CC	GO:0005634	nucleus	IEP	HCCA
CC	GO:0005743	mitochondrial inner membrane	IEP	HCCA
CC	GO:0005759	mitochondrial matrix	IEP	HCCA
BP	GO:0006066	alcohol metabolic process	IEP	HCCA
BP	GO:0006766	vitamin metabolic process	IEP	HCCA
BP	GO:0006767	water-soluble vitamin metabolic process	IEP	HCCA
BP	GO:0006772	thiamine metabolic process	IEP	HCCA
BP	GO:0006790	sulfur compound metabolic process	IEP	HCCA
BP	GO:0006848	pyruvate transport	IEP	HCCA
BP	GO:0006850	mitochondrial pyruvate transmembrane transport	IEP	HCCA
BP	GO:0006887	exocytosis	IEP	HCCA
BP	GO:0007049	cell cycle	IEP	HCCA
MF	GO:0008237	metallopeptidase activity	IEP	HCCA
BP	GO:0009110	vitamin biosynthetic process	IEP	HCCA
BP	GO:0009228	thiamine biosynthetic process	IEP	HCCA
BP	GO:0015711	organic anion transport	IEP	HCCA
BP	GO:0015718	monocarboxylic acid transport	IEP	HCCA
BP	GO:0015849	organic acid transport	IEP	HCCA
CC	GO:0019866	organelle inner membrane	IEP	HCCA
CC	GO:0031090	organelle membrane	IEP	HCCA
CC	GO:0031966	mitochondrial membrane	IEP	HCCA
CC	GO:0031974	membrane-enclosed lumen	IEP	HCCA
BP	GO:0032940	secretion by cell	IEP	HCCA
BP	GO:0034308	primary alcohol metabolic process	IEP	HCCA
BP	GO:0034309	primary alcohol biosynthetic process	IEP	HCCA
BP	GO:0042364	water-soluble vitamin biosynthetic process	IEP	HCCA
BP	GO:0042723	thiamine-containing compound metabolic process	IEP	HCCA
BP	GO:0042724	thiamine-containing compound biosynthetic process	IEP	HCCA
CC	GO:0043233	organelle lumen	IEP	HCCA
BP	GO:0044272	sulfur compound biosynthetic process	IEP	HCCA
BP	GO:0044283	small molecule biosynthetic process	IEP	HCCA
BP	GO:0046165	alcohol biosynthetic process	IEP	HCCA
BP	GO:0046903	secretion	IEP	HCCA
BP	GO:0046942	carboxylic acid transport	IEP	HCCA
CC	GO:0070013	intracellular organelle lumen	IEP	HCCA
BP	GO:0072527	pyrimidine-containing compound metabolic process	IEP	HCCA
BP	GO:0072528	pyrimidine-containing compound biosynthetic process	IEP	HCCA
CC	GO:0098687	chromosomal region	IEP	HCCA
CC	GO:0099023	vesicle tethering complex	IEP	HCCA
CC	GO:0110165	cellular anatomical entity	IEP	HCCA
BP	GO:0140352	export from cell	IEP	HCCA
BP	GO:1901475	pyruvate transmembrane transport	IEP	HCCA
BP	GO:1901615	organic hydroxy compound metabolic process	IEP	HCCA
BP	GO:1901617	organic hydroxy compound biosynthetic process	IEP	HCCA
BP	GO:1903825	organic acid transmembrane transport	IEP	HCCA
BP	GO:1905039	carboxylic acid transmembrane transport	IEP	HCCA
BP	GO:1990542	mitochondrial transmembrane transport	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002553	Clathrin/coatomer_adapt-like_N	36	551
IPR015151	B-adaptin_app_sub_C	718	790

External Links

No external refs found!

Aop_g14503

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation