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  5. Aop_g14502

Aop_g14502


Description : not classified & original description: none


Gene families : OG0004324 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004324_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g14502

Target Alias Description ECC score Gene Family Method Actions
Als_g09293 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g18079 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.10G021500.1 Ceric.10G021500 not classified & original description: pacid=50612055... 0.05 OrthoFinder output from all 47 species
Ehy_g23151 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01037516001 No alias Cold shock protein 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_24061 No alias Cold shock protein 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Sam_g09786 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g24965 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e024430_P001 Zm00001e024430 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000966 RNA 5'-end processing IEP HCCA
BP GO:0001682 tRNA 5'-leader removal IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
CC GO:0030677 ribonuclease P complex IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0099116 tRNA 5'-end processing IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
CC GO:1902555 endoribonuclease complex IEP HCCA
CC GO:1905348 endonuclease complex IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR001878 Znf_CCHC 203 219
IPR001878 Znf_CCHC 163 178
IPR001878 Znf_CCHC 314 330
IPR001878 Znf_CCHC 284 295
No external refs found!