Aop_g14348 (TOP1BETA, TOP1)


Aliases : TOP1BETA, TOP1

Description : DNA topoisomerase *(TOP1) & original description: none


Gene families : OG0002461 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002461_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g14348

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00059p00193620 MGO1, TOP1,... Cell cycle.interphase.DNA replication.preinitiation.TOP1... 0.02 OrthoFinder output from all 47 species
AMTR_s00061p00026580 MGO1, TOP1,... Cell cycle.interphase.DNA replication.preinitiation.TOP1... 0.03 OrthoFinder output from all 47 species
Ceric.07G062200.1 TOP1BETA, TOP1,... DNA topoisomerase *(TOP1) & original description:... 0.02 OrthoFinder output from all 47 species
Dac_g05782 MGO1, TOP1, TOP1ALPHA DNA topoisomerase *(TOP1) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g04011 TOP1BETA, TOP1 DNA topoisomerase *(TOP1) & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g35484 TOP1BETA, TOP1 DNA topoisomerase *(TOP1) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g18323 TOP1BETA, TOP1 DNA topoisomerase *(TOP1) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0003917 DNA topoisomerase type I (single strand cut, ATP-independent) activity IEA Interproscan
BP GO:0006265 DNA topological change IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0004363 glutathione synthase activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006575 cellular modified amino acid metabolic process IEP HCCA
BP GO:0006749 glutathione metabolic process IEP HCCA
BP GO:0006750 glutathione biosynthetic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016881 acid-amino acid ligase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019184 nonribosomal peptide biosynthetic process IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0042398 cellular modified amino acid biosynthetic process IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1904091 non-ribosomal peptide synthetase activity IEP HCCA
InterPro domains Description Start Stop
IPR008336 TopoI_DNA-bd_euk 447 658
IPR013500 TopoI_cat_euk 661 883
IPR025834 TopoI_C_dom 921 989
No external refs found!