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  5. Aop_g13955

Aop_g13955


Description : not classified & original description: none


Gene families : OG0001572 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001572_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g13955

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00018p00255680 evm_27.TU.AmTr_v1... Beta-carotene isomerase D27, chloroplastic... 0.03 OrthoFinder output from all 47 species
Aev_g02991 No alias carotenoid isomerase *(DWARF27) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g49501 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g06641 No alias carotenoid isomerase *(DWARF27) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g11103 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g06285 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g31538 No alias carotenoid isomerase *(DWARF27) & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0386.g067568 No alias not classified & original description: CDS=62-952 0.05 OrthoFinder output from all 47 species
Cba_g00750 No alias carotenoid isomerase *(DWARF27) & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.02G115700.1 Ceric.02G115700 carotenoid isomerase *(DWARF27) & original description:... 0.03 OrthoFinder output from all 47 species
Dcu_g02296 No alias carotenoid isomerase *(DWARF27) & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g12391 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g06957 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g31522 No alias carotenoid isomerase *(DWARF27) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g03239 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01019663001 No alias Beta-carotene isomerase D27, chloroplastic OS=Oryza... 0.03 OrthoFinder output from all 47 species
LOC_Os08g02210.2 LOC_Os08g02210 Beta-carotene isomerase D27, chloroplastic... 0.05 OrthoFinder output from all 47 species
Len_g16141 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g25833 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g25954 No alias carotenoid isomerase *(DWARF27) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g11491 No alias carotenoid isomerase *(DWARF27) & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g13325 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_167711g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Mp7g16410.1 No alias Beta-carotene isomerase D27, chloroplastic... 0.03 OrthoFinder output from all 47 species
Msp_g11577 No alias carotenoid isomerase *(DWARF27) & original description: none 0.08 OrthoFinder output from all 47 species
Nbi_g26733 No alias carotenoid isomerase *(DWARF27) & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g30675 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g19910 No alias carotenoid isomerase *(DWARF27) & original description: none 0.07 OrthoFinder output from all 47 species
Pir_g09207 No alias carotenoid isomerase *(DWARF27) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g26521 No alias carotenoid isomerase *(DWARF27) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g62487 No alias carotenoid isomerase *(DWARF27) & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0073.g017141 No alias carotenoid isomerase *(DWARF27) & original description:... 0.03 OrthoFinder output from all 47 species
Sam_g06073 No alias carotenoid isomerase *(DWARF27) & original description: none 0.08 OrthoFinder output from all 47 species
Solyc08g008630.4.1 Solyc08g008630 Beta-carotene isomerase D27, chloroplastic OS=Oryza... 0.04 OrthoFinder output from all 47 species
Spa_g05404 No alias carotenoid isomerase *(DWARF27) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g28773 No alias carotenoid isomerase *(DWARF27) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e029191_P001 Zm00001e029191 Beta-carotene isomerase D27, chloroplastic... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003951 NAD+ kinase activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006739 NADP metabolic process IEP HCCA
BP GO:0006741 NADP biosynthetic process IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
BP GO:0019359 nicotinamide nucleotide biosynthetic process IEP HCCA
BP GO:0019362 pyridine nucleotide metabolic process IEP HCCA
BP GO:0019363 pyridine nucleotide biosynthetic process IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
BP GO:0046496 nicotinamide nucleotide metabolic process IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0072524 pyridine-containing compound metabolic process IEP HCCA
BP GO:0072525 pyridine-containing compound biosynthetic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
MF GO:2001070 starch binding IEP HCCA
InterPro domains Description Start Stop
IPR025114 D27-like_C 146 228
No external refs found!