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  5. Aop_g13785

Aop_g13785


Description : not classified & original description: none


Gene families : OG0000599 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000599_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g13785
Cluster HCCA: Cluster_290

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00109p00128070 evm_27.TU.AmTr_v1... Probable E3 ubiquitin-protein ligase EDA40... 0.06 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000042.58 No alias No description available 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020801.34 No alias No description available 0.01 OrthoFinder output from all 47 species
LOC_Os02g56280.1 LOC_Os02g56280 E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os10g32760.1 LOC_Os10g32760 Probable E3 ubiquitin-protein ligase WAVH2... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
InterPro domains Description Start Stop
IPR002035 VWF_A 305 476
IPR001841 Znf_RING 71 100
IPR032838 Vwaint_dom 657 722
No external refs found!