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  5. Aop_g13372

Aop_g13372


Description : component *(GatA) of glutamyl-tRNA-dependent amidotransferase complex & original description: none


Gene families : OG0005328 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005328_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g13372
Cluster HCCA: Cluster_51

Target Alias Description ECC score Gene Family Method Actions
Ceric.09G091800.1 Ceric.09G091800 component *(GatA) of glutamyl-tRNA-dependent... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001221.6 No alias Glutamyl-tRNA(Gln) amidotransferase subunit A,... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001221.7 No alias Glutamyl-tRNA(Gln) amidotransferase subunit A,... 0.01 OrthoFinder output from all 47 species
GSVIVT01020788001 No alias Protein biosynthesis.aminoacyl-tRNA synthetase... 0.04 OrthoFinder output from all 47 species
Lfl_g08069 No alias component *(GatA) of glutamyl-tRNA-dependent... 0.03 OrthoFinder output from all 47 species
MA_10436166g0010 No alias component GatA of glutamyl-tRNA-dependent... 0.03 OrthoFinder output from all 47 species
Ore_g28904 No alias component *(GatA) of glutamyl-tRNA-dependent... 0.03 OrthoFinder output from all 47 species
Zm00001e006778_P003 Zm00001e006778 component GatA of glutamyl-tRNA-dependent... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016485 protein processing IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
BP GO:0071586 CAAX-box protein processing IEP HCCA
InterPro domains Description Start Stop
IPR023631 Amidase_dom 68 517
No external refs found!