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  5. Aop_g13148

Aop_g13148


Description : translation elongation factor *(EF-P) & original description: none


Gene families : OG0006339 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006339_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g13148
Cluster HCCA: Cluster_36

Target Alias Description ECC score Gene Family Method Actions
AT3G08740 No alias elongation factor P (EF-P) family protein 0.11 OrthoFinder output from all 47 species
Als_g20082 No alias translation elongation factor *(EF-P) & original... 0.02 OrthoFinder output from all 47 species
Aob_g02958 No alias translation elongation factor *(EF-P) & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene26427.t1 Aspi01Gene26427 translation elongation factor *(EF-P) & original... 0.04 OrthoFinder output from all 47 species
Azfi_s0359.g066840 No alias translation elongation factor *(EF-P) & original... 0.06 OrthoFinder output from all 47 species
Ehy_g00568 No alias translation elongation factor *(EF-P) & original... 0.05 OrthoFinder output from all 47 species
GSVIVT01030181001 No alias Protein biosynthesis.organelle translation... 0.04 OrthoFinder output from all 47 species
LOC_Os11g02450.1 LOC_Os11g02450 EF-P translation elongation factor 0.08 OrthoFinder output from all 47 species
LOC_Os12g02380.1 LOC_Os12g02380 EF-P translation elongation factor 0.02 OrthoFinder output from all 47 species
Mp4g02120.1 No alias EF-P translation elongation factor 0.08 OrthoFinder output from all 47 species
Msp_g01862 No alias translation elongation factor *(EF-P) & original... 0.04 OrthoFinder output from all 47 species
Nbi_g06931 No alias translation elongation factor *(EF-P) & original... 0.06 OrthoFinder output from all 47 species
Pir_g19280 No alias translation elongation factor *(EF-P) & original... 0.04 OrthoFinder output from all 47 species
Ppi_g47563 No alias translation elongation factor *(EF-P) & original... 0.02 OrthoFinder output from all 47 species
Solyc10g075020.3.1 Solyc10g075020 EF-P translation elongation factor 0.08 OrthoFinder output from all 47 species
Spa_g11669 No alias translation elongation factor *(EF-P) & original... 0.06 OrthoFinder output from all 47 species
Zm00001e039313_P003 Zm00001e039313 EF-P translation elongation factor 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm IEA Interproscan
BP GO:0043043 peptide biosynthetic process IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006810 transport IEP HCCA
BP GO:0010207 photosystem II assembly IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
InterPro domains Description Start Stop
IPR001059 Transl_elong_P/YeiP_cen 139 189
IPR013185 Transl_elong_KOW-like 71 127
IPR015365 Elong-fact-P_C 197 252
No external refs found!