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  5. Aop_g13084

Aop_g13084


Description : not classified & original description: none


Gene families : OG0001116 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001116_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g13084

Target Alias Description ECC score Gene Family Method Actions
AT2G02160 No alias CCCH-type zinc finger family protein 0.02 OrthoFinder output from all 47 species
Adi_g059322 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g33970 No alias regulatory protein *(ZC11A) of mRNA export & original... 0.04 OrthoFinder output from all 47 species
Dac_g05770 No alias regulatory protein *(ZC11A) of mRNA export & original... 0.03 OrthoFinder output from all 47 species
Len_g08778 No alias regulatory protein *(ZC11A) of mRNA export & original... 0.02 OrthoFinder output from all 47 species
MA_17019g0010 No alias C3H zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Mp2g02990.1 No alias C3H zinc finger transcription factor. regulatory... 0.01 OrthoFinder output from all 47 species
Msp_g06797 No alias regulatory protein *(ZC11A) of mRNA export & original... 0.03 OrthoFinder output from all 47 species
Msp_g13228 No alias regulatory protein *(ZC11A) of mRNA export & original... 0.03 OrthoFinder output from all 47 species
Nbi_g17064 No alias regulatory protein *(ZC11A) of mRNA export & original... 0.02 OrthoFinder output from all 47 species
Pir_g10434 No alias regulatory protein *(ZC11A) of mRNA export & original... 0.03 OrthoFinder output from all 47 species
Ppi_g13826 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g008170.3.1 Solyc01g008170 C3H zinc finger transcription factor. regulatory... 0.03 OrthoFinder output from all 47 species
Spa_g30365 No alias regulatory protein *(ZC11A) of mRNA export & original... 0.03 OrthoFinder output from all 47 species
Spa_g49982 No alias regulatory protein *(ZC11A) of mRNA export & original... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0004363 glutathione synthase activity IEP HCCA
MF GO:0004652 polynucleotide adenylyltransferase activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
BP GO:0006575 cellular modified amino acid metabolic process IEP HCCA
BP GO:0006749 glutathione metabolic process IEP HCCA
BP GO:0006750 glutathione biosynthetic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016881 acid-amino acid ligase activity IEP HCCA
BP GO:0019184 nonribosomal peptide biosynthetic process IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0042398 cellular modified amino acid biosynthetic process IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043631 RNA polyadenylation IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0070566 adenylyltransferase activity IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1904091 non-ribosomal peptide synthetase activity IEP HCCA
InterPro domains Description Start Stop
IPR000571 Znf_CCCH 21 42
No external refs found!