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  5. Aop_g12887

Aop_g12887 (ATMYB120, MYB120)


Aliases : ATMYB120, MYB120

Description : MYB class-R2R3 subgroup-18 transcription factor & original description: none


Gene families : OG0000015 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g12887
Cluster HCCA: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
AT1G56650 PAP1, ATMYB75,... production of anthocyanin pigment 1 0.03 OrthoFinder output from all 47 species
AT1G74080 ATMYB122, MYB122 myb domain protein 122 0.03 OrthoFinder output from all 47 species
Dcu_g09100 MYB86, ATMYB86 MYB class-R2R3 subgroup-13 transcription factor &... 0.02 OrthoFinder output from all 47 species
GSVIVT01016768001 ATMYB4, MYB4 RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
LOC_Os04g45020.1 MYB19, AtMYB19,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
MA_471905g0010 MYB3, ATMYB3 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc04g014470.3.1 AtMYB20, MYB20,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Spa_g49704 ATMYB120, MYB120 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e036223_P001 ATMYB5, MYB5,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006400 tRNA modification IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0008175 tRNA methyltransferase activity IEP HCCA
MF GO:0008176 tRNA (guanine-N7-)-methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 87 130
IPR001005 SANT/Myb 34 81
No external refs found!