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  5. Aop_g12635

Aop_g12635


Description : RlmN-type rRNA methyltransferase & original description: none


Gene families : OG0001131 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001131_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g12635
Cluster HCCA: Cluster_51

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00221620 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00058p00171240 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT2G39670 No alias Radical SAM superfamily protein 0.05 OrthoFinder output from all 47 species
Adi_g114284 No alias RlmN-type rRNA methyltransferase & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0665.g081748 No alias RlmN-type rRNA methyltransferase & original description:... 0.04 OrthoFinder output from all 47 species
Azfi_s3121.g114606 No alias RlmN-type rRNA methyltransferase & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.08G040900.1 Ceric.08G040900 RlmN-type rRNA methyltransferase & original description:... 0.04 OrthoFinder output from all 47 species
Cre02.g109250 No alias No description available 0.01 OrthoFinder output from all 47 species
Cre05.g238500 No alias No description available 0.01 OrthoFinder output from all 47 species
Dac_g14671 No alias RlmN-type rRNA methyltransferase & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g01123 No alias RlmN-type rRNA methyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g10051 No alias RlmN-type rRNA methyltransferase & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01007579001 No alias No description available 0.02 OrthoFinder output from all 47 species
GSVIVT01016561001 No alias No description available 0.05 OrthoFinder output from all 47 species
GSVIVT01020239001 No alias No description available 0.04 OrthoFinder output from all 47 species
Gb_41070 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os01g45370.1 LOC_Os01g45370 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os01g74190.1 LOC_Os01g74190 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Lfl_g06989 No alias RlmN-type rRNA methyltransferase & original description: none 0.06 OrthoFinder output from all 47 species
Mp1g04510.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp7g12660.1 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Nbi_g03514 No alias RlmN-type rRNA methyltransferase & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g14699 No alias RlmN-type rRNA methyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g03927 No alias RlmN-type rRNA methyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g10707 No alias RlmN-type rRNA methyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g16801 No alias RlmN-type rRNA methyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g10580 No alias RlmN-type rRNA methyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g08674 No alias RlmN-type rRNA methyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Smo85220 No alias No description available 0.05 OrthoFinder output from all 47 species
Solyc05g005590.4.1 Solyc05g005590 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc06g030570.3.1 Solyc06g030570 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
MF GO:0051536 iron-sulfur cluster binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
InterPro domains Description Start Stop
IPR007197 rSAM 173 332
No external refs found!