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  5. Aop_g12443

Aop_g12443


Description : E3 ubiquitin ligase *(PIRE) & original description: none


Gene families : OG0001463 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001463_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g12443

Target Alias Description ECC score Gene Family Method Actions
AT3G48070 No alias RING/U-box superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g096124 No alias E3 ubiquitin ligase *(PIRE) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g32309 No alias E3 ubiquitin ligase *(PIRE) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g23831 No alias E3 ubiquitin ligase *(PIRE) & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os04g38970.2 LOC_Os04g38970 RING-C2-class E3 ligase 0.02 OrthoFinder output from all 47 species
MpVg01180.1 No alias No annotation 0.02 OrthoFinder output from all 47 species
Msp_g09628 No alias E3 ubiquitin ligase *(PIRE) & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g15798 No alias E3 ubiquitin ligase *(PIRE) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g32555 No alias E3 ubiquitin ligase *(PIRE) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g37146 No alias E3 ubiquitin ligase *(PIRE) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g52267 No alias E3 ubiquitin ligase *(PIRE) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
CC GO:0005739 mitochondrion IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0032780 negative regulation of ATP-dependent activity IEP HCCA
MF GO:0042030 ATPase inhibitor activity IEP HCCA
BP GO:0043462 regulation of ATP-dependent activity IEP HCCA
BP GO:0044092 negative regulation of molecular function IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0065009 regulation of molecular function IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!