1. Home
  2. Species
  3. Amblovenatum opulentum
  4. Sequence
  5. Aop_g12257

Aop_g12257


Description : SSU processome assembly factor *(MPP10) & original description: none


Gene families : OG0005340 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005340_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g12257
Cluster HCCA: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00096p00039880 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.02 OrthoFinder output from all 47 species
AT5G66540 No alias FUNCTIONS IN: molecular_function unknown; INVOLVED IN:... 0.03 OrthoFinder output from all 47 species
Azfi_s0064.g035641 No alias SSU processome assembly factor *(MPP10) & original... 0.04 OrthoFinder output from all 47 species
Cba_g05256 No alias SSU processome assembly factor *(MPP10) & original... 0.02 OrthoFinder output from all 47 species
Ceric.03G006200.1 Ceric.03G006200 SSU processome assembly factor *(MPP10) & original... 0.05 OrthoFinder output from all 47 species
Ceric.07G070300.1 Ceric.07G070300 SSU processome assembly factor *(MPP10) & original... 0.03 OrthoFinder output from all 47 species
Cre08.g370601 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.04 OrthoFinder output from all 47 species
Dac_g23465 No alias SSU processome assembly factor *(MPP10) & original... 0.03 OrthoFinder output from all 47 species
Dcu_g05554 No alias SSU processome assembly factor *(MPP10) & original... 0.03 OrthoFinder output from all 47 species
Dde_g16767 No alias SSU processome assembly factor *(MPP10) & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01007723001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.03 OrthoFinder output from all 47 species
LOC_Os11g04200.1 LOC_Os11g04200 SSU processome assembly factor (MPP10) 0.02 OrthoFinder output from all 47 species
MA_77639g0010 No alias SSU processome assembly factor (MPP10) 0.03 OrthoFinder output from all 47 species
Mp8g00320.1 No alias SSU processome assembly factor (MPP10) 0.04 OrthoFinder output from all 47 species
Msp_g07866 No alias SSU processome assembly factor *(MPP10) & original... 0.03 OrthoFinder output from all 47 species
Sam_g38181 No alias SSU processome assembly factor *(MPP10) & original... 0.02 OrthoFinder output from all 47 species
Smo423082 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.03 OrthoFinder output from all 47 species
Solyc03g112820.4.1 Solyc03g112820 SSU processome assembly factor (MPP10) 0.05 OrthoFinder output from all 47 species
Zm00001e032203_P002 Zm00001e032203 SSU processome assembly factor (MPP10) 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA Interproscan
CC GO:0005732 sno(s)RNA-containing ribonucleoprotein complex IEA Interproscan
BP GO:0006364 rRNA processing IEA Interproscan
CC GO:0034457 Mpp10 complex IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004730 pseudouridylate synthase activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
MF GO:0051087 chaperone binding IEP HCCA
InterPro domains Description Start Stop
IPR012173 Mpp10 277 512
IPR012173 Mpp10 45 261
No external refs found!