1. Home
  2. Species
  3. Amblovenatum opulentum
  4. Sequence
  5. Aop_g12229

Aop_g12229


Description : not classified & original description: none


Gene families : OG0002335 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002335_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g12229
Cluster HCCA: Cluster_283

Target Alias Description ECC score Gene Family Method Actions
Adi_g053487 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g059667 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0174.g055961 No alias not classified & original description: CDS=1-780 0.04 OrthoFinder output from all 47 species
Dde_g00503 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g24427 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g51576 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g23008 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g48250 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g28682 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
BP GO:0000105 histidine biosynthetic process IEP HCCA
MF GO:0004635 phosphoribosyl-AMP cyclohydrolase activity IEP HCCA
MF GO:0005319 lipid transporter activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006547 histidine metabolic process IEP HCCA
BP GO:0006869 lipid transport IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP HCCA
MF GO:0019238 cyclohydrolase activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
MF GO:0030151 molybdenum ion binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0061024 membrane organization IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0120009 intermembrane lipid transfer IEP HCCA
MF GO:0120013 lipid transfer activity IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 193 255
IPR000504 RRM_dom 28 91
No external refs found!