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  5. Aop_g11952

Aop_g11952


Description : pre-40S ribosomal subunit assembly factor *(RRP7) & original description: none


Gene families : OG0005810 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005810_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g11952

Target Alias Description ECC score Gene Family Method Actions
Adi_g019593 No alias pre-40S ribosomal subunit assembly factor *(RRP7) &... 0.03 OrthoFinder output from all 47 species
Ceric.03G019700.1 Ceric.03G019700 pre-40S ribosomal subunit assembly factor *(RRP7) &... 0.03 OrthoFinder output from all 47 species
Cre01.g052200 No alias No description available 0.02 OrthoFinder output from all 47 species
LOC_Os02g49620.1 LOC_Os02g49620 pre-40S ribosomal subunit assembly factor (RRP7) 0.02 OrthoFinder output from all 47 species
Zm00001e015713_P002 Zm00001e015713 pre-40S ribosomal subunit assembly factor (RRP7) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000502 proteasome complex IEP HCCA
MF GO:0004809 tRNA (guanine-N2-)-methyltransferase activity IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0008175 tRNA methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0009894 regulation of catabolic process IEP HCCA
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0042176 regulation of protein catabolic process IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1905368 peptidase complex IEP HCCA
CC GO:1905369 endopeptidase complex IEP HCCA
InterPro domains Description Start Stop
IPR024326 RRP7_C 72 195
No external refs found!