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  5. Aop_g11335

Aop_g11335


Description : not classified & original description: none


Gene families : OG0000085 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000085_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g11335
Cluster HCCA: Cluster_283

Target Alias Description ECC score Gene Family Method Actions
AT3G27090 No alias DCD (Development and Cell Death) domain protein 0.02 OrthoFinder output from all 47 species
Adi_g087066 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g088779 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g113900 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g06277 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0780.g086675 No alias not classified & original description: CDS=1-675 0.04 OrthoFinder output from all 47 species
Cba_g03364 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g15381 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g15480 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.1Z076400.1 Ceric.1Z076400 not classified & original description: pacid=50565862... 0.06 OrthoFinder output from all 47 species
Dac_g02157 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g10259 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g05824 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g06864 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g02510 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g17942 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g22634 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_00306 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os05g07220.1 LOC_Os05g07220 B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 112.0) 0.02 OrthoFinder output from all 47 species
Lfl_g28515 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g39767 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp6g13060.1 No alias B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 261.0) 0.02 OrthoFinder output from all 47 species
Msp_g08360 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g46214 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g29003 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g00944 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g10958 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g11178 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g13335 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g06335 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0011.g005045 No alias not classified & original description: CDS=5-796 0.02 OrthoFinder output from all 47 species
Sam_g26560 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g11517 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g08253 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR013989 Dev_and_cell_death_domain 117 241
No external refs found!