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  5. Aop_g11203

Aop_g11203


Description : not classified & original description: none


Gene families : OG0005121 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005121_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g11203
Cluster HCCA: Cluster_283

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0028.g024031 No alias not classified & original description: CDS=168-2150 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000123.23 No alias No description available 0.02 OrthoFinder output from all 47 species
Cre12.g538500 No alias No description available 0.01 OrthoFinder output from all 47 species
Ehy_g02665 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01017246001 No alias No description available 0.04 OrthoFinder output from all 47 species
LOC_Os03g18840.1 LOC_Os03g18840 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp5g00060.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Pir_g13559 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0027.g009705 No alias not classified & original description: CDS=1-1959 0.02 OrthoFinder output from all 47 species
Sam_g36919 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc03g116380.4.1 Solyc03g116380 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g16157 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e001372_P001 Zm00001e001372 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030127 COPII vesicle coat IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
InterPro domains Description Start Stop
IPR007148 SSU_processome_Utp12 497 599
No external refs found!