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  5. Aop_g11146

Aop_g11146


Description : component *(eEF1B-gamma) of eEF1B eEF1A-GDP-recycling complex & original description: none


Gene families : OG0001535 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001535_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g11146
Cluster HCCA: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
AT1G09640 No alias Translation elongation factor EF1B, gamma chain 0.04 OrthoFinder output from all 47 species
AT1G57720 No alias Translation elongation factor EF1B, gamma chain 0.04 OrthoFinder output from all 47 species
Ala_g01717 No alias component *(eEF1B-gamma) of eEF1B eEF1A-GDP-recycling... 0.06 OrthoFinder output from all 47 species
Als_g42428 No alias component *(eEF1B-gamma) of eEF1B eEF1A-GDP-recycling... 0.02 OrthoFinder output from all 47 species
Aob_g06588 No alias component *(eEF1B-gamma) of eEF1B eEF1A-GDP-recycling... 0.03 OrthoFinder output from all 47 species
Azfi_s0051.g031261 No alias component *(eEF1B-gamma) of eEF1B eEF1A-GDP-recycling... 0.03 OrthoFinder output from all 47 species
Cba_g11340 No alias component *(eEF1B-gamma) of eEF1B eEF1A-GDP-recycling... 0.03 OrthoFinder output from all 47 species
Ceric.09G069500.1 Ceric.09G069500 component *(eEF1B-gamma) of eEF1B eEF1A-GDP-recycling... 0.07 OrthoFinder output from all 47 species
Dac_g06348 No alias component *(eEF1B-gamma) of eEF1B eEF1A-GDP-recycling... 0.08 OrthoFinder output from all 47 species
Ehy_g02576 No alias component *(eEF1B-gamma) of eEF1B eEF1A-GDP-recycling... 0.03 OrthoFinder output from all 47 species
GSVIVT01025941001 No alias Protein biosynthesis.translation elongation.eEF1B... 0.07 OrthoFinder output from all 47 species
LOC_Os02g12794.3 LOC_Os02g12794 component eEF1B-gamma of eEF1B eEF1A-GDP-recycling complex 0.07 OrthoFinder output from all 47 species
LOC_Os02g12800.1 LOC_Os02g12800 component eEF1B-gamma of eEF1B eEF1A-GDP-recycling complex 0.05 OrthoFinder output from all 47 species
LOC_Os06g37440.1 LOC_Os06g37440 component eEF1B-gamma of eEF1B eEF1A-GDP-recycling complex 0.09 OrthoFinder output from all 47 species
Len_g17738 No alias component *(eEF1B-gamma) of eEF1B eEF1A-GDP-recycling... 0.03 OrthoFinder output from all 47 species
Mp7g04100.1 No alias component eEF1B-gamma of eEF1B eEF1A-GDP-recycling complex 0.13 OrthoFinder output from all 47 species
Msp_g08318 No alias component *(eEF1B-gamma) of eEF1B eEF1A-GDP-recycling... 0.05 OrthoFinder output from all 47 species
Msp_g34531 No alias component *(eEF1B-gamma) of eEF1B eEF1A-GDP-recycling... 0.03 OrthoFinder output from all 47 species
Nbi_g40134 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g33444 No alias component *(eEF1B-gamma) of eEF1B eEF1A-GDP-recycling... 0.02 OrthoFinder output from all 47 species
Pir_g05852 No alias component *(eEF1B-gamma) of eEF1B eEF1A-GDP-recycling... 0.04 OrthoFinder output from all 47 species
Sam_g07305 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g13003 No alias component *(eEF1B-gamma) of eEF1B eEF1A-GDP-recycling... 0.04 OrthoFinder output from all 47 species
Sam_g13004 No alias component *(eEF1B-gamma) of eEF1B eEF1A-GDP-recycling... 0.04 OrthoFinder output from all 47 species
Sam_g32153 No alias component *(eEF1B-gamma) of eEF1B eEF1A-GDP-recycling... 0.04 OrthoFinder output from all 47 species
Sam_g46603 No alias component *(eEF1B-gamma) of eEF1B eEF1A-GDP-recycling... 0.02 OrthoFinder output from all 47 species
Sam_g50575 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc06g011280.3.1 Solyc06g011280 component eEF1B-gamma of eEF1B eEF1A-GDP-recycling complex 0.06 OrthoFinder output from all 47 species
Spa_g08037 No alias component *(eEF1B-gamma) of eEF1B eEF1A-GDP-recycling... 0.11 OrthoFinder output from all 47 species
Tin_g02785 No alias component *(eEF1B-gamma) of eEF1B eEF1A-GDP-recycling... 0.07 OrthoFinder output from all 47 species
Zm00001e014465_P001 Zm00001e014465 component eEF1B-gamma of eEF1B eEF1A-GDP-recycling complex 0.08 OrthoFinder output from all 47 species
Zm00001e024937_P001 Zm00001e024937 component eEF1B-gamma of eEF1B eEF1A-GDP-recycling complex 0.05 OrthoFinder output from all 47 species
Zm00001e030647_P003 Zm00001e030647 component eEF1B-gamma of eEF1B eEF1A-GDP-recycling complex 0.05 OrthoFinder output from all 47 species
Zm00001e037277_P002 Zm00001e037277 component eEF1B-gamma of eEF1B eEF1A-GDP-recycling complex 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003746 translation elongation factor activity IEA Interproscan
BP GO:0006414 translational elongation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005741 mitochondrial outer membrane IEP HCCA
CC GO:0005789 endoplasmic reticulum membrane IEP HCCA
CC GO:0005840 ribosome IEP HCCA
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
CC GO:0031968 organelle outer membrane IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
MF GO:0043168 anion binding IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR004046 GST_C 124 197
IPR004045 Glutathione_S-Trfase_N 4 76
IPR001662 EF1B_G_C 272 381
No external refs found!