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  5. Aop_g11108

Aop_g11108 (LINC2)


Aliases : LINC2

Description : nuclear lamina lamin-like protein *(CRWN) & original description: none


Gene families : OG0002096 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002096_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g11108

Target Alias Description ECC score Gene Family Method Actions
Ceric.07G023500.1 LINC2, Ceric.07G023500 nuclear lamina lamin-like protein *(CRWN) & original... 0.06 OrthoFinder output from all 47 species
Dcu_g09858 LINC2 nuclear lamina lamin-like protein *(CRWN) & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01007428001 LINC4 Cytoskeleton.cytoskeleton-nucleoskeleton linking.nuclear... 0.02 OrthoFinder output from all 47 species
GSVIVT01011972001 LINC3 Cytoskeleton.cytoskeleton-nucleoskeleton linking.nuclear... 0.03 OrthoFinder output from all 47 species
GSVIVT01031076001 LINC1 Cytoskeleton.cytoskeleton-nucleoskeleton linking.nuclear... 0.04 OrthoFinder output from all 47 species
MA_10432363g0010 LINC2 CRWN nuclear lamina lamin-like protein 0.03 OrthoFinder output from all 47 species
Nbi_g10182 LINC2 nuclear lamina lamin-like protein *(CRWN) & original... 0.02 OrthoFinder output from all 47 species
Sam_g14580 No alias nuclear lamina lamin-like protein *(CRWN) & original... 0.05 OrthoFinder output from all 47 species
Tin_g03944 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g43217 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
BP GO:0040008 regulation of growth IEP HCCA
BP GO:0045927 positive regulation of growth IEP HCCA
BP GO:0048518 positive regulation of biological process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!