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  5. Aop_g11095

Aop_g11095


Description : not classified & original description: none


Gene families : OG0012786 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0012786_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g11095
Cluster HCCA: Cluster_319

Target Alias Description ECC score Gene Family Method Actions
Als_g03833 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g27355 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.36G060100.1 Ceric.36G060100 not classified & original description: pacid=50568536... 0.04 OrthoFinder output from all 47 species
Dde_g24207 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g12175 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g13267 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g07554 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g38938 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g01331 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g07061 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Tin_g06766 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006400 tRNA modification IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0008192 RNA guanylyltransferase activity IEP HCCA
MF GO:0008193 tRNA guanylyltransferase activity IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0015079 potassium ion transmembrane transporter activity IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0070568 guanylyltransferase activity IEP HCCA
BP GO:0071805 potassium ion transmembrane transport IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 416 464
IPR002885 Pentatricopeptide_repeat 215 261
IPR002885 Pentatricopeptide_repeat 621 666
IPR002885 Pentatricopeptide_repeat 316 363
IPR002885 Pentatricopeptide_repeat 492 514
IPR002885 Pentatricopeptide_repeat 87 106
IPR002885 Pentatricopeptide_repeat 520 550
IPR002885 Pentatricopeptide_repeat 116 141
IPR002885 Pentatricopeptide_repeat 591 617
No external refs found!