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  5. Lfl_g09541

Lfl_g09541


Description : not classified & original description: none


Gene families : OG0007895 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007895_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g09541

Target Alias Description ECC score Gene Family Method Actions
Adi_g023642 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cre03.g158750 No alias DEAD-box ATP-dependent RNA helicase 30 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Gb_40721 No alias DEAD-box ATP-dependent RNA helicase 52A OS=Oryza sativa... 0.01 OrthoFinder output from all 47 species
Mp7g11930.1 No alias DEAD-box ATP-dependent RNA helicase 52A OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
Smo75384 No alias DEAD-box ATP-dependent RNA helicase 52A OS=Oryza sativa... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003729 mRNA binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0033218 amide binding IEP HCCA
CC GO:0035145 exon-exon junction complex IEP HCCA
MF GO:0120227 acyl-CoA binding IEP HCCA
MF GO:1901567 fatty acid derivative binding IEP HCCA
MF GO:1901681 sulfur compound binding IEP HCCA
InterPro domains Description Start Stop
IPR011545 DEAD/DEAH_box_helicase_dom 170 341
IPR001650 Helicase_C 377 494
No external refs found!