1. Home
  2. Species
  3. Amblovenatum opulentum
  4. Sequence
  5. Aop_g08994

Aop_g08994


Description : nucleoporin of nuclear pore complex *(NUP1/NUP136) & original description: none


Gene families : OG0002028 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002028_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g08994
Cluster HCCA: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
Adi_g011582 No alias nucleoporin of nuclear pore complex *(NUP1/NUP136) &... 0.03 OrthoFinder output from all 47 species
Ala_g06113 No alias nucleoporin of nuclear pore complex *(NUP1/NUP136) &... 0.03 OrthoFinder output from all 47 species
Als_g31899 No alias nucleoporin of nuclear pore complex *(NUP1/NUP136) &... 0.02 OrthoFinder output from all 47 species
Ceric.07G044000.1 Ceric.07G044000 not classified & original description: pacid=50627215... 0.03 OrthoFinder output from all 47 species
Ceric.1Z123400.1 Ceric.1Z123400 nucleoporin of nuclear pore complex *(NUP1/NUP136) &... 0.04 OrthoFinder output from all 47 species
Ehy_g04036 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_18080 No alias NUP1/NUP136 nucleoporin of nuclear pore complex 0.03 OrthoFinder output from all 47 species
Ore_g28862 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g10463 No alias nucleoporin of nuclear pore complex *(NUP1/NUP136) &... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0043.g012850 No alias not classified & original description: CDS=3-2681 0.03 OrthoFinder output from all 47 species
Sam_g13887 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc05g055110.4.1 Solyc05g055110 NUP1/NUP136 nucleoporin of nuclear pore complex 0.02 OrthoFinder output from all 47 species
Solyc11g006390.2.1 Solyc11g006390 NUP1/NUP136 nucleoporin of nuclear pore complex 0.04 OrthoFinder output from all 47 species
Zm00001e005928_P001 Zm00001e005928 NUP1/NUP136 nucleoporin of nuclear pore complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!