- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : RPH1
Description : not classified & original description: none
Gene families : OG0006050 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006050_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Aop_g08928 | |
| Cluster | HCCA: Cluster_51 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Adi_g077594 | RPH1 | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Aev_g24131 | RPH1 | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Ala_g04605 | RPH1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g11899 | RPH1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00001374.9 | RPH1 | No description available | 0.05 | OrthoFinder output from all 47 species | |
| Cre03.g145207 | RPH1 | No description available | 0.01 | OrthoFinder output from all 47 species | |
| Dac_g24608 | RPH1 | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Dcu_g11977 | RPH1 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g06539 | RPH1 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01011060001 | RPH1 | No description available | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os05g33520.1 | RPH1, LOC_Os05g33520 | no description available(sp|m1c5m7|rph1_soltu : 245.0) | 0.02 | OrthoFinder output from all 47 species | |
| MA_122925g0010 | RPH1 | no description available(sp|q9zu82|rph1_arath : 127.0) | 0.03 | OrthoFinder output from all 47 species | |
| Mp3g10840.1 | RPH1 | no description available(sp|q9zu82|rph1_arath : 223.0) | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g14460 | RPH1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g06747 | RPH1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g18881 | RPH1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g25811 | RPH1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g15587 | RPH1 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0073.g017006 | RPH1 | not classified & original description: CDS=688-1419 | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g29486 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Solyc05g055850.3.1 | RPH1, Solyc05g055850 | no description available(sp|m1c5m7|rph1_soltu : 397.0) | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g11278 | RPH1 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g19889 | RPH1 | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Zm00001e031640_P002 | RPH1, Zm00001e031640 | no description available(sp|m1c5m7|rph1_soltu : 241.0) | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003677 | DNA binding | IEP | HCCA |
| MF | GO:0003690 | double-stranded DNA binding | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| BP | GO:0006259 | DNA metabolic process | IEP | HCCA |
| BP | GO:0006281 | DNA repair | IEP | HCCA |
| BP | GO:0006298 | mismatch repair | IEP | HCCA |
| BP | GO:0006790 | sulfur compound metabolic process | IEP | HCCA |
| BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | HCCA |
| BP | GO:0008104 | protein localization | IEP | HCCA |
| BP | GO:0015031 | protein transport | IEP | HCCA |
| BP | GO:0016226 | iron-sulfur cluster assembly | IEP | HCCA |
| BP | GO:0022607 | cellular component assembly | IEP | HCCA |
| MF | GO:0030983 | mismatched DNA binding | IEP | HCCA |
| BP | GO:0031163 | metallo-sulfur cluster assembly | IEP | HCCA |
| BP | GO:0033036 | macromolecule localization | IEP | HCCA |
| BP | GO:0033554 | cellular response to stress | IEP | HCCA |
| BP | GO:0045184 | establishment of protein localization | IEP | HCCA |
| MF | GO:0051287 | NAD binding | IEP | HCCA |
| BP | GO:0051716 | cellular response to stimulus | IEP | HCCA |
| BP | GO:0070727 | cellular macromolecule localization | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |