1. Home
  2. Species
  3. Amblovenatum opulentum
  4. Sequence
  5. Aop_g08469

Aop_g08469


Description : accessory protein *(PlCALM3) & original description: none


Gene families : OG0000273 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000273_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g08469
Cluster HCCA: Cluster_284

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00028p00200060 evm_27.TU.AmTr_v1... Vesicle trafficking.clathrin coated vesicle (CCV)... 0.02 OrthoFinder output from all 47 species
Als_g14788 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os02g07900.1 LOC_Os02g07900 ECA1/2 clathrin coated vesicle adaptor protein 0.02 OrthoFinder output from all 47 species
Lfl_g04130 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g06894 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g09579 No alias accessory protein *(PlCALM3) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0115.g020948 No alias not classified & original description: CDS=2516-4330 0.03 OrthoFinder output from all 47 species
Sam_g07860 No alias accessory protein *(PlCALM3) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g07861 No alias accessory protein *(PlCALM3) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc07g007820.3.1 Solyc07g007820 Putative clathrin assembly protein At5g35200... 0.02 OrthoFinder output from all 47 species
Solyc12g006000.1.1 Solyc12g006000 clathrin assembly protein (AP180) 0.02 OrthoFinder output from all 47 species
Zm00001e036365_P001 Zm00001e036365 Putative clathrin assembly protein At5g35200... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005543 phospholipid binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEP HCCA
MF GO:0003678 DNA helicase activity IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
BP GO:0032200 telomere organization IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR011417 ANTH_dom 34 302
No external refs found!