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  5. Aop_g08261

Aop_g08261 (ATRNL, AtRLG1, RNL)


Aliases : ATRNL, AtRLG1, RNL

Description : multifunctional tRNA ligase *(RLG1) & original description: none


Gene families : OG0002159 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002159_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g08261
Cluster HCCA: Cluster_293

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene09451.t1 ATRNL, AtRLG1,... multifunctional tRNA ligase *(RLG1) & original description: none 0.03 OrthoFinder output from all 47 species
Cre07.g352800 No alias No description available 0.01 OrthoFinder output from all 47 species
Dac_g21407 ATRNL, AtRLG1, RNL multifunctional tRNA ligase *(RLG1) & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01025133001 ATRNL, AtRLG1, RNL tRNA ligase 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006534 cysteine metabolic process IEP HCCA
BP GO:0006606 protein import into nucleus IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0009069 serine family amino acid metabolic process IEP HCCA
BP GO:0009092 homoserine metabolic process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
BP GO:0019346 transsulfuration IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0034504 protein localization to nucleus IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0050667 homocysteine metabolic process IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
BP GO:0051170 import into nucleus IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
MF GO:0061608 nuclear import signal receptor activity IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
MF GO:0140104 molecular carrier activity IEP HCCA
MF GO:0140142 nucleocytoplasmic carrier activity IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!