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  5. Lfl_g09427

Lfl_g09427 (HST, ATHST, PDS2)


Aliases : HST, ATHST, PDS2

Description : homogentisate solanesyltransferase *(HST) & original description: none


Gene families : OG0004743 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004743_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g09427
Cluster HCCA: Cluster_133

Target Alias Description ECC score Gene Family Method Actions
AT3G11945 HST, ATHST, PDS2 homogentisate prenyltransferase 0.07 OrthoFinder output from all 47 species
Aop_g11365 HST, ATHST, PDS2 homogentisate solanesyltransferase *(HST) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene40827.t1 HST, ATHST,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.11G008300.1 HST, ATHST,... homogentisate solanesyltransferase *(HST) & original... 0.11 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021464.31 HST, ATHST, PDS2 Homogentisate solanesyltransferase, chloroplastic... 0.02 OrthoFinder output from all 47 species
Cre06.g283750 HST, ATHST, PDS2 Coenzyme metabolism.prenylquinone... 0.03 OrthoFinder output from all 47 species
Gb_01838 HST, ATHST, PDS2 homogentisate solanesyltransferase (HST) 0.03 OrthoFinder output from all 47 species
Len_g36965 HST, ATHST, PDS2 homogentisate solanesyltransferase *(HST) & original... 0.05 OrthoFinder output from all 47 species
Mp2g15430.1 HST, ATHST, PDS2 homogentisate solanesyltransferase (HST) 0.03 OrthoFinder output from all 47 species
Msp_g19281 HST, ATHST, PDS2 homogentisate solanesyltransferase *(HST) & original... 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0002.g000899 HST, ATHST, PDS2 homogentisate solanesyltransferase *(HST) & original... 0.04 OrthoFinder output from all 47 species
Smo110629 HST, ATHST, PDS2 Coenzyme metabolism.prenylquinone... 0.02 OrthoFinder output from all 47 species
Solyc03g051810.4.1 HST, ATHST,... Homogentisate solanesyltransferase, chloroplastic... 0.06 OrthoFinder output from all 47 species
Zm00001e010611_P002 HST, ATHST,... homogentisate solanesyltransferase (HST) 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP HCCA
BP GO:0003333 amino acid transmembrane transport IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0005381 iron ion transmembrane transporter activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006826 iron ion transport IEP HCCA
BP GO:0006865 amino acid transport IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015849 organic acid transport IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016881 acid-amino acid ligase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0034755 iron ion transmembrane transport IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0046915 transition metal ion transmembrane transporter activity IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
MF GO:0070567 cytidylyltransferase activity IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
BP GO:1903825 organic acid transmembrane transport IEP HCCA
BP GO:1905039 carboxylic acid transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR000537 UbiA_prenyltransferase 120 360
No external refs found!