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  5. Aop_g07672

Aop_g07672 (APUM12, PUM12)


Aliases : APUM12, PUM12

Description : not classified & original description: none


Gene families : OG0000858 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000858_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g07672
Cluster HCCA: Cluster_300

Target Alias Description ECC score Gene Family Method Actions
Als_g63300 APUM12, PUM12 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0068.g016386 APUM8, PUM8 not classified & original description: CDS=1-2142 0.03 OrthoFinder output from all 47 species
Tin_g06123 APUM12, PUM12 not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
MF GO:0031267 small GTPase binding IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
MF GO:0051020 GTPase binding IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
InterPro domains Description Start Stop
IPR001313 Pumilio_RNA-bd_rpt 718 736
IPR001313 Pumilio_RNA-bd_rpt 796 823
IPR001313 Pumilio_RNA-bd_rpt 680 713
IPR001313 Pumilio_RNA-bd_rpt 610 639
IPR001313 Pumilio_RNA-bd_rpt 753 785
IPR001313 Pumilio_RNA-bd_rpt 533 566
IPR001313 Pumilio_RNA-bd_rpt 645 675
IPR001313 Pumilio_RNA-bd_rpt 569 602
IPR000571 Znf_CCCH 406 427
No external refs found!