Aop_g07608 (AtRABH1e, RABH1e)

Aliases : AtRABH1e, RABH1e

Description : H-class RAB GTPase & original description: none

Gene families : OG0001773 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001773_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aop_g07608
Cluster	HCCA: Cluster_284

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00038p00155900	AtRABH1e,...	Vesicle trafficking.regulation of membrane tethering and...	0.02	OrthoFinder output from all 47 species
Ala_g07680	AtRABH1e, RABH1e	H-class RAB GTPase & original description: none	0.03	OrthoFinder output from all 47 species
Cre01.g047550	RAB6A, ATRABH1B,...	Vesicle trafficking.regulation of membrane tethering and...	0.02	OrthoFinder output from all 47 species
Dac_g08815	AtRABH1e, RABH1e	H-class RAB GTPase & original description: none	0.01	OrthoFinder output from all 47 species
Dde_g15877	AtRABH1e, RABH1e	H-class RAB GTPase & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01013222001	RAB6A, ATRABH1B,...	Vesicle trafficking.regulation of membrane tethering and...	0.05	OrthoFinder output from all 47 species
GSVIVT01018361001	RAB6A, ATRABH1B,...	Vesicle trafficking.regulation of membrane tethering and...	0.03	OrthoFinder output from all 47 species
LOC_Os03g09140.1	AtRABH1e,...	H-class RAB GTPase	0.03	OrthoFinder output from all 47 species
Lfl_g03701	AtRABH1e, RABH1e	H-class RAB GTPase & original description: none	0.02	OrthoFinder output from all 47 species
Lfl_g03768	AtRABH1e, RABH1e	H-class RAB GTPase & original description: none	0.02	OrthoFinder output from all 47 species
MA_10426002g0020	AtRABH1e, RABH1e	H-class RAB GTPase	0.02	OrthoFinder output from all 47 species
Nbi_g15790	AtRABH1e, RABH1e	H-class RAB GTPase & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g00352	No alias	H-class RAB GTPase & original description: none	0.03	OrthoFinder output from all 47 species
Smo145680	AtRABH1e, RABH1e	Vesicle trafficking.regulation of membrane tethering and...	0.02	OrthoFinder output from all 47 species
Solyc01g088560.3.1	RAB6A, ATRABH1B,...	H-class RAB GTPase	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003924	GTPase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003700	DNA-binding transcription factor activity	IEP	HCCA
MF	GO:0003743	translation initiation factor activity	IEP	HCCA
MF	GO:0004107	chorismate synthase activity	IEP	HCCA
BP	GO:0006355	regulation of DNA-templated transcription	IEP	HCCA
BP	GO:0008150	biological_process	IEP	HCCA
BP	GO:0009072	aromatic amino acid metabolic process	IEP	HCCA
BP	GO:0009073	aromatic amino acid family biosynthetic process	IEP	HCCA
BP	GO:0009889	regulation of biosynthetic process	IEP	HCCA
BP	GO:0010468	regulation of gene expression	IEP	HCCA
BP	GO:0010556	regulation of macromolecule biosynthetic process	IEP	HCCA
BP	GO:0016053	organic acid biosynthetic process	IEP	HCCA
MF	GO:0016835	carbon-oxygen lyase activity	IEP	HCCA
MF	GO:0016838	carbon-oxygen lyase activity, acting on phosphates	IEP	HCCA
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0019222	regulation of metabolic process	IEP	HCCA
BP	GO:0031323	regulation of cellular metabolic process	IEP	HCCA
BP	GO:0031326	regulation of cellular biosynthetic process	IEP	HCCA
BP	GO:0050789	regulation of biological process	IEP	HCCA
BP	GO:0050794	regulation of cellular process	IEP	HCCA
BP	GO:0051171	regulation of nitrogen compound metabolic process	IEP	HCCA
BP	GO:0051252	regulation of RNA metabolic process	IEP	HCCA
BP	GO:0060255	regulation of macromolecule metabolic process	IEP	HCCA
BP	GO:0065007	biological regulation	IEP	HCCA
BP	GO:0080090	regulation of primary metabolic process	IEP	HCCA
MF	GO:0140110	transcription regulator activity	IEP	HCCA
BP	GO:1903506	regulation of nucleic acid-templated transcription	IEP	HCCA
BP	GO:2001141	regulation of RNA biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001806	Small_GTPase	15	173

External Links

No external refs found!

Aop_g07608 (AtRABH1e, RABH1e)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation