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  5. Aop_g07465

Aop_g07465


Description : flap structure-specific endonuclease *(FEN1) & original description: none


Gene families : OG0002365 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002365_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g07465
Cluster HCCA: Cluster_314

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0092.g043057 No alias flap structure-specific endonuclease *(FEN1) & original... 0.03 OrthoFinder output from all 47 species
Cba_g09363 No alias flap structure-specific endonuclease *(FEN1) & original... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001214.13 No alias DNA damage response.DNA repair mechanisms.base excision... 0.03 OrthoFinder output from all 47 species
Cre03.g145687 No alias DNA damage response.DNA repair mechanisms.base excision... 0.03 OrthoFinder output from all 47 species
Gb_33641 No alias flap structure-specific endonuclease (FEN1). flap... 0.03 OrthoFinder output from all 47 species
LOC_Os05g46270.1 LOC_Os05g46270 flap structure-specific endonuclease (FEN1). flap... 0.02 OrthoFinder output from all 47 species
MA_9971131g0010 No alias flap structure-specific endonuclease (FEN1). flap... 0.03 OrthoFinder output from all 47 species
Mp8g12390.1 No alias flap structure-specific endonuclease (FEN1). flap... 0.03 OrthoFinder output from all 47 species
Nbi_g21086 No alias flap structure-specific endonuclease *(FEN1) & original... 0.03 OrthoFinder output from all 47 species
Solyc01g102370.4.1 Solyc01g102370 flap structure-specific endonuclease (FEN1). flap... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003678 DNA helicase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
CC GO:0005741 mitochondrial outer membrane IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
BP GO:0006275 regulation of DNA replication IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
MF GO:0031267 small GTPase binding IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
CC GO:0031968 organelle outer membrane IEP HCCA
BP GO:0032392 DNA geometric change IEP HCCA
BP GO:0032508 DNA duplex unwinding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0051020 GTPase binding IEP HCCA
BP GO:0051052 regulation of DNA metabolic process IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
CC GO:0070531 BRCA1-A complex IEP HCCA
CC GO:0070552 BRISC complex IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR006086 XPG-I_dom 150 234
IPR006085 XPG_DNA_repair_N 1 107
No external refs found!