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  5. Aop_g07437

Aop_g07437 (ATSLY1)


Aliases : ATSLY1

Description : not classified & original description: none


Gene families : OG0004244 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004244_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g07437

Target Alias Description ECC score Gene Family Method Actions
Ceric.09G038700.1 ATSLY1, Ceric.09G038700 not classified & original description: pacid=50588187... 0.04 OrthoFinder output from all 47 species
Cre12.g521350 ATSLY1 SEC1 family transport protein SLY1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Dcu_g03913 ATSLY1 not classified & original description: none 0.07 OrthoFinder output from all 47 species
GSVIVT01023951001 ATSLY1 SEC1 family transport protein SLY1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
LOC_Os03g42320.1 ATSLY1, LOC_Os03g42320 SEC1 family transport protein SLY1 OS=Oryza sativa... 0.05 OrthoFinder output from all 47 species
Lfl_g01777 ATSLY1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp3g02060.1 ATSLY1 SEC1 family transport protein SLY1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Msp_g12960 ATSLY1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g10821 ATSLY1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g112150.3.1 ATSLY1, Solyc01g112150 SEC1 family transport protein SLY1 OS=Arabidopsis... 0.07 OrthoFinder output from all 47 species
Spa_g07440 ATSLY1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g02049 ATSLY1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e002799_P001 ATSLY1, Zm00001e002799 SEC1 family transport protein SLY1 OS=Oryza sativa... 0.08 OrthoFinder output from all 47 species
Zm00001e023511_P002 ATSLY1, Zm00001e023511 SEC1 family transport protein SLY1 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0016192 vesicle-mediated transport IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
CC GO:0017119 Golgi transport complex IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030127 COPII vesicle coat IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
InterPro domains Description Start Stop
IPR001619 Sec1-like 35 593
No external refs found!