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  5. Aop_g07304

Aop_g07304


Description : ubiquitin-proteasome shuttle factor *(DSK2) & original description: none


Gene families : OG0001912 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001912_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g07304

Target Alias Description ECC score Gene Family Method Actions
AT2G17190 No alias ubiquitin family protein 0.03 OrthoFinder output from all 47 species
Aev_g13863 DSK2 ubiquitin-proteasome shuttle factor *(DSK2) & original... 0.04 OrthoFinder output from all 47 species
Als_g44178 No alias ubiquitin-proteasome shuttle factor *(DSK2) & original... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000983.16 No alias Ubiquitin domain-containing protein DSK2b OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Dcu_g05609 DSK2 ubiquitin-proteasome shuttle factor *(DSK2) & original... 0.04 OrthoFinder output from all 47 species
GSVIVT01003842001 No alias Ubiquitin domain-containing protein DSK2b OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01003843001 DSK2 Ubiquitin domain-containing protein DSK2b OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Mp1g23030.1 DSK2 autophagic adaptor protein (DSK2) 0.05 OrthoFinder output from all 47 species
Msp_g05701 No alias ubiquitin-proteasome shuttle factor *(DSK2) & original... 0.03 OrthoFinder output from all 47 species
Nbi_g04835 No alias ubiquitin-proteasome shuttle factor *(DSK2) & original... 0.04 OrthoFinder output from all 47 species
Ore_g25539 DSK2 ubiquitin-proteasome shuttle factor *(DSK2) & original... 0.03 OrthoFinder output from all 47 species
Ore_g42947 DSK2 ubiquitin-proteasome shuttle factor *(DSK2) & original... 0.02 OrthoFinder output from all 47 species
Pir_g00593 No alias ubiquitin-proteasome shuttle factor *(DSK2) & original... 0.05 OrthoFinder output from all 47 species
Solyc02g082800.3.1 DSK2, Solyc02g082800 autophagic adaptor protein (DSK2) 0.03 OrthoFinder output from all 47 species
Solyc03g032160.3.1 DSK2, Solyc03g032160 autophagic adaptor protein (DSK2) 0.04 OrthoFinder output from all 47 species
Spa_g06039 DSK2 ubiquitin-proteasome shuttle factor *(DSK2) & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030127 COPII vesicle coat IEP HCCA
MF GO:0030976 thiamine pyrophosphate binding IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
MF GO:0050997 quaternary ammonium group binding IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
MF GO:1901681 sulfur compound binding IEP HCCA
InterPro domains Description Start Stop
IPR015940 UBA 511 547
IPR000626 Ubiquitin-like_dom 17 85
No external refs found!